| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_4884 |
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| Symbol | |
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| ID | 6179500 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | + |
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| Start bp | 2029433 |
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| End bp | 2031829 |
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| Gene Length | 2397 bp |
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| Protein Length | 798 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641684637 |
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| Product | patatin |
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| Protein accession | YP_001811548 |
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| Protein GI | 172063897 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1752] Predicted esterase of the alpha-beta hydrolase superfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.000000395852 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACAGCGA CCGCTACTCT CCGCTGGCTC GGGGTGCGCC GGATCGGCGC AACGCTCGTT
GCGCTCTGGT GCTGCACCGT TGCCGCGCAG CCCTTGCCGG CCGCCGACAC CGCCACCCGC
ACCGCGCCGG TGGCCGCTGC CGCCGCACCG AACGCCGCAC CCAACGCCAC GCCCGCGCCA
ACCTGCACCG CCGACGGCGG CCCGGCGGGC CGGGCGCCGG TCGGCCTCGT GCTGTCCGGC
GGCGGCGCGC GCGGCTACGC GCACCTCGGC GTGCTGAAGG TGCTCGAGGA GAACCGCATC
CCGATCGACT GCATCGCCGG CACCAGCATG GGCGCCGTGG TCGGCGGCCT GTATGCGAGC
GGCATGGCCG CCGACGAGAT GCAACAGCGG CTGTCCGAGG TGAACCTGGC CGACATCGCC
TTCGACGTGA CCGACCGCGC GGACCTGCCG CAAACCAGCC GCGAGGACGA GCGCCTGTAT
ATCAACAGCC TGACGCTCGG CTTCGGCAAG AAAGGCGTGA AGGCGCCGGT CGGCCTCGTC
CAGGGCAACC GGCTGCAGGC GCTGCTCGCG AACTGGACGG CCGCCGTGCC GACCAACCAG
CCGTTCGACC AGTTGCCGAT CCCTTATCGC GCGGTCGCGA CCGACCTGCA GACGGGCCAG
ATGGTCGTGC TGGACCACGG CTCGCTGCCG CTCGCCATCC GCGCGAGCAT GGCGATGCCC
GGCCTGTTCG CACCGGCCGA GATCAACGGC CGCGCGCTCG TCGACGGCGG GCTCGTCAGC
AACCTGCCCG TCGACACCGC GCGGCGCATG GGGGCGAAGG TCGTGATCGC GGTCGACATC
GGCTCGCCGC TGCGTCCGCT CGACGCGCTC GCGTCGCCGG CCGACGTGAT GCAGCAGATG
GTCGGCATCC TGATCCGCCA GAACGTGACG TCGCAGCGCC AGCAGCTCGC CGCACAGGAC
GTGCTGCTCA CGCCCGACCT CGGCGCGCTC GCGTTCACCG ATTTCCAGAA CGCGAAGCAG
GCGATCGCCG CCGGCGCGGC CGCCGCGACC GCGGCGCTGC CGCGGCTCAA GCGCTTCGCG
CTCACGCCGG AACAGTACGC GGCCTACCGG TCCGCCCATG CGCAGCCGCT GCCGCCGCCG
ATCCGCATCA CGCGCATCGA GATCAAGACG AGCGGCGGCA TCCCGAAGCG GGTCGTCAGC
GACGCGCTGC ACGTGAAACC GGGCGACACC TACGATCCGG CGACCGTGAG CCAGGACCTG
CTCGGGCTGA CGACCGGCGG CAATTTCGAG AGCGTGACGC AGCAGATCGT GAGCCACGGC
GACGAAAACG TGCTCGTGAT CGATGCGCGC GAGAAATACT GGGGGCCGAA CTTCCTGCTG
TTCGGCGTCG GGATGTCGAG CAGTTCGACC GACGAAGGCG GCTTCCGCCT GCACGTCGGC
TACCGGCGGC CATGGCTCAC CGAATCGGGG CTCGAATTCC GCGCGGATAC GACGATCGGC
AGCGACCTGG TGTCCGCGCG CGTCGAATTG CGCCAGCCGT TGCCGGCCGC GTACGGTTTC
TACATTTCGC CCTATGCGGA ATATCAGCGT CGCTACGTGA ACCTGTACGA CGACAGCGGC
GAGGTGAAAC TGAACCAGTA TCTGATGCAG ACGGCACGCA CCGGGATCGA CTTCGGGCTG
CCGATCGGCC GGCTCGGCGA CCTCCGGATG GGCATCGGCT ACGCGACCGG GCACGGCTCA
CCGAACTACA ACCTGCCGTT GTCGTTCGCT GACGGCAGCT CGACCTGGCC GAGCTTCACG
TCGCAGGCGC TGACCGCGCG CGCGCGGCTC GTCATCGATC AGCTCGACGA CCCGATGTTC
CCGCGCCGGG GCTACTACGG CGAATTTCGC GTCGAACGCT CGCTGTGGTC GCACAACAGC
CAGTCCGCGT CGGACCTCGC CGATACGTCG AACACGCCTT ACACCGAGAT CTACGGCAAG
GCGATGATCG CGCAGCAGTT CGGCCGGCAC AGTGTCAGCG CGACGATCGA GGGCGGCAAG
AGCATCGGCG GGACCAACCT GATCAACGCG TTCAACTTCA CGCTCGGCGG GTTCCAGCAT
CTCGCCGCGT ATGCGGCCGA CCAGTTGACC GGCAACGAAC TCGCATACGG GAACGTGACT
TACATGAACC AGCTCGCGAC GTTCAACGCG TCGCCGATCA AGGCGCTGTC GGTGGGCGCC
AGCGCGGAAG TCGGCAACGT GTGGTCGAGC GGCGTGCAGG TGGGCGGCGG CACGCTCAAG
CAGAGCTATA CGTTCTTCAC GAGCCTGTCG ACCGCGTTCG GTCCGCTGTA CATGGGCGTC
GCGCTCGCGC CGGGCGGGCG GCGCAACATC TACCTGCAGC TCGGCCGCAC GTATTGA
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| Protein sequence | MTATATLRWL GVRRIGATLV ALWCCTVAAQ PLPAADTATR TAPVAAAAAP NAAPNATPAP
TCTADGGPAG RAPVGLVLSG GGARGYAHLG VLKVLEENRI PIDCIAGTSM GAVVGGLYAS
GMAADEMQQR LSEVNLADIA FDVTDRADLP QTSREDERLY INSLTLGFGK KGVKAPVGLV
QGNRLQALLA NWTAAVPTNQ PFDQLPIPYR AVATDLQTGQ MVVLDHGSLP LAIRASMAMP
GLFAPAEING RALVDGGLVS NLPVDTARRM GAKVVIAVDI GSPLRPLDAL ASPADVMQQM
VGILIRQNVT SQRQQLAAQD VLLTPDLGAL AFTDFQNAKQ AIAAGAAAAT AALPRLKRFA
LTPEQYAAYR SAHAQPLPPP IRITRIEIKT SGGIPKRVVS DALHVKPGDT YDPATVSQDL
LGLTTGGNFE SVTQQIVSHG DENVLVIDAR EKYWGPNFLL FGVGMSSSST DEGGFRLHVG
YRRPWLTESG LEFRADTTIG SDLVSARVEL RQPLPAAYGF YISPYAEYQR RYVNLYDDSG
EVKLNQYLMQ TARTGIDFGL PIGRLGDLRM GIGYATGHGS PNYNLPLSFA DGSSTWPSFT
SQALTARARL VIDQLDDPMF PRRGYYGEFR VERSLWSHNS QSASDLADTS NTPYTEIYGK
AMIAQQFGRH SVSATIEGGK SIGGTNLINA FNFTLGGFQH LAAYAADQLT GNELAYGNVT
YMNQLATFNA SPIKALSVGA SAEVGNVWSS GVQVGGGTLK QSYTFFTSLS TAFGPLYMGV
ALAPGGRRNI YLQLGRTY
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