Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_4512 |
Symbol | |
ID | 6180567 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010552 |
Strand | + |
Start bp | 1615651 |
End bp | 1617165 |
Gene Length | 1515 bp |
Protein Length | 504 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641684273 |
Product | EmrB/QacA family drug resistance transporter |
Protein accession | YP_001811184 |
Protein GI | 172063533 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGAACCG ATACTCTCCT TGCTCCGCCG GCCGCCGAAG CGGCCCGCCG CGACACGCCG ACCGGGCTGG TGATCGCCGC GCTGCTGCTC GTCATGCTGC TGTCCGCGCT CGACCAGACG ATCGTGTCGA CCGCGCTGCC GACGATCGTC GGCGAGCTCG GCGGCCTCGA TCAGCTGTCG TGGGTCGTCA CCGCGTACCT GCTGTCGTCG ACGGTCGTGC TGCCGCTGTA CGGCAAGCTC GGCGATCTGT ACGGCCGCAA GATCGTGCTG CAGGCCGCGA TCGTGCTGTT TCTCGCCGGC TCCGCGCTGT GCGGCATCGC GCAGGACATG ACGCAGCTGA TCGTGCTGCG CGCGCTGCAA GGGCTCGGCG GCGGCGGGCT GATGGTCGTG ACGATGGCCG CGATCGGCGA CCTCGTGCCG CCCGACCGCC GCGCGCGCTA CCAGGGGATG TTCGGCGGCG TGTATGGCCT CGCGACGATC GTCGGGCCGC TGCTCGGCGG CTTCCTGGTC GAACATCTGT CGTGGCGCTG GATCTTCACG ATCAACCTGC CGCTCGGCGC GCTCGCGCTC GCGGTGATCG TCATCGTGTT CCGGCCACAC ACCGAGCACG TGAAGCACCG CATCGACTAC ATGGGCGCCG CGTTCCTCGC GACGGCCCTC ACCTGCGTGA TCCTGTTCAC CAGCGAAGGC GGTTCGCTGC TGCCGTGGTC GTCGCCGCAG CTGTGGATGA CGCTCGTGCT CGGGCTGGTC GCACTCGGCG GCTTCGTCTA CGAGGAGCGG CTCGCGGCCG AGCCGATCAT GCCGCTCGAA CTGTTCCGTC AGCGCACCTT CGTGCTGATG AGCCTGATCG GCTTCGTCGT CGGCATCGCG CTGTTCGGTT CGGTCACGTT CATTCCGCTC TATCTGCAGG TCGTGAAGGG CTCGACGCCG TCGCAGGCCG GGATGCAGCT GCTGCCGATG ATGGGCGGGA CGCTCGCGAT GTCGGTCGCG AGCGGCCGGC TGATCTCGCG GTTCGGCACG TATCGCCCGT TTCCGATCGC GGGGACGCTG CTCGGCGGCA TCGCGATGGC CCTGCTGTCG ACGCTGTCGC TCGACACGCC GCTGCACACC ATGTACGCGT ACATGGCGCT GCTCGGGATC GGGCTCGGCA TGGTGATGCC GGTGCTGACG CTCGCCGTGC AGAACACGGT CGAATTCCGG CACATGGGTG TCGCGACGTC GGGCGCGACG CTGTTCCGCT CGATCGGCGG GTCGCTCGGC GTCGCCGCAT TCGGCGCGCT GTTCTCGCAC GGGCTGCAGT CGCGCCTCAC GCAGGCGCTG GCGGCCGGCA CGGAACTGCC GCCCGCGCTC GGCCCGGAGG CCGTGCACCA GTTGCCGGAG GCGGTGCGCG CTGCGTACCT GCACGCGTTC GCCGGGTCGC TGCATGTGGT GTATCTGTCG GCGGCGGGCG TGATCGCGAT CGCCTTCGTG CTCGCGTGGT TCGTCCAGAG TGCGCCGCTG CGCACGCATC ACTGA
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Protein sequence | MRTDTLLAPP AAEAARRDTP TGLVIAALLL VMLLSALDQT IVSTALPTIV GELGGLDQLS WVVTAYLLSS TVVLPLYGKL GDLYGRKIVL QAAIVLFLAG SALCGIAQDM TQLIVLRALQ GLGGGGLMVV TMAAIGDLVP PDRRARYQGM FGGVYGLATI VGPLLGGFLV EHLSWRWIFT INLPLGALAL AVIVIVFRPH TEHVKHRIDY MGAAFLATAL TCVILFTSEG GSLLPWSSPQ LWMTLVLGLV ALGGFVYEER LAAEPIMPLE LFRQRTFVLM SLIGFVVGIA LFGSVTFIPL YLQVVKGSTP SQAGMQLLPM MGGTLAMSVA SGRLISRFGT YRPFPIAGTL LGGIAMALLS TLSLDTPLHT MYAYMALLGI GLGMVMPVLT LAVQNTVEFR HMGVATSGAT LFRSIGGSLG VAAFGALFSH GLQSRLTQAL AAGTELPPAL GPEAVHQLPE AVRAAYLHAF AGSLHVVYLS AAGVIAIAFV LAWFVQSAPL RTHH
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