| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_4167 |
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| Symbol | |
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| ID | 6179808 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | - |
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| Start bp | 1210348 |
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| End bp | 1211877 |
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| Gene Length | 1530 bp |
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| Protein Length | 509 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641683936 |
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| Product | transcriptional regulator |
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| Protein accession | YP_001810847 |
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| Protein GI | 172063196 |
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| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
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| COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.117681 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.924645 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGATTG GCGTCAAAAT TCCTGCATTC CAGGTAGCCA CTGCAATGGA CATCGCGATC
CGCATCGAAG GCCGTCACGA CCTGACCGGG CAAATCTTCC GTCAGCTTCG CACCGCGATC
GTCGACGGGC GGCTCGAGGG CGGCGCCCGG CTGCCGTCGA CGCGCGATCT CGCGAAGCAG
CTCGGCGTGT CGCGCAAGAC GACGCTCGAT GCGTTCGAGC GCCTCGTCGC CGAGGGCTAT
CTGAACACGC GCGCGGGCGA CGGCACGTTC GTCGCCGGCG GCCTCGCGCG GGTTCCGCAT
GCGCCGGTCG CGTCGACACC GTCGCTCGTC GAGGACACGC CGCGCGTCCA CTCGGTCGAC
GCACGTGCGC TGTGGGACGA CCTGCCCGAC GCACTCGCGA TGCCGGCACC GCAGGCGTCG
CCCGCCTTCG ACTTCCGCGG CGGCGTGACC GACAAGACGC TGTTCCCGTT CGACGCGTGG
CGCCGCTGCC TGCATCACGC ATTGCGCCAG CAGGCGCGCG GCCCGGGCCA GTACCACGAC
CCGGCCGGCG ACCCGCAATT GCGCGGCGCG ATCGCGCGTT ACGTCGGGTT CAGCCGCGCG
GTGGCCTGCG GCTGGGACGA CGTGCTCGTC ACGCAAGGCG CGCAACAGGC GCTCGACCTG
ATCGCGCGCG TGGTCGTGCG GCCGGGCGAC GTCGTCGCGG TCGAGAATCC CGGCTATCCG
CCGGCACGCG CGGCGTTCGC ATCGCTCGGC GCGACGGTGA TCAGCGTGCC GGTCGACGCA
CACGGCCTTG TGACCGAGCG GCTGCCCGAC GACGCGCGGC TCGTCTACGT GACGCCGTCG
CATCAGTTCC CGCTCGGGAT GCCGATGACG CTGGACCGTC GTGTCGCGCT GCTCGAATGG
GCGCAGCGCC GTCGCGCGGT GATCATCGAG GACGACTACG ACGGCGAGTT CCGCTTCGAA
GGCCGGCCGG TGGAGTCGCT GAAGAGCCTC GACCGCACGG GCCTCGTCGC GTACGTCGGC
ACGTTCTCGA AGACGATCTT TCCCGAACTG CGGATCGGCT ACACGATTCC GCCGCGCTCG
CTGCGCGGCG CGCTCGCGAA GGCGAAGCAG ATCGTCGACT GGCATACCTG CACGCTGACG
CAGGCGGCGC TCGCCCGCTT CATGCTCGAA GGCGATTTCG CACGGCACCT GCGGCGCGTG
CAGAAGCACT ATGACGCGCG CCGCAAGATG CTGCTCGCGC ATTTGCGCGG CGGCCTCGCG
CCGTGGTTCG ACACGATCGT GCCGACCGCC GGCATCCACC TCGCCGCGCT CCTGAAACCC
GGGCTCGACG AAGCCGCGCT GGTGCGCGCG GCCCGCGAGC ACGACATCGG CCTGTACGGG
ATCTCCGCGT TCCACGTCGG CTCGGCCGCG CGCGCGGGGC TGCTGTTCGG CTATGGCGGA
ATCGACGCGC TGCGCATCGA TACCGCGCTC GCGAAACTGG CTGTGGTGCT GAATTCGGGC
GACTTCGAGG GGGCTTCACT GGTTACCTGA
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| Protein sequence | MLIGVKIPAF QVATAMDIAI RIEGRHDLTG QIFRQLRTAI VDGRLEGGAR LPSTRDLAKQ
LGVSRKTTLD AFERLVAEGY LNTRAGDGTF VAGGLARVPH APVASTPSLV EDTPRVHSVD
ARALWDDLPD ALAMPAPQAS PAFDFRGGVT DKTLFPFDAW RRCLHHALRQ QARGPGQYHD
PAGDPQLRGA IARYVGFSRA VACGWDDVLV TQGAQQALDL IARVVVRPGD VVAVENPGYP
PARAAFASLG ATVISVPVDA HGLVTERLPD DARLVYVTPS HQFPLGMPMT LDRRVALLEW
AQRRRAVIIE DDYDGEFRFE GRPVESLKSL DRTGLVAYVG TFSKTIFPEL RIGYTIPPRS
LRGALAKAKQ IVDWHTCTLT QAALARFMLE GDFARHLRRV QKHYDARRKM LLAHLRGGLA
PWFDTIVPTA GIHLAALLKP GLDEAALVRA AREHDIGLYG ISAFHVGSAA RAGLLFGYGG
IDALRIDTAL AKLAVVLNSG DFEGASLVT
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