| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_4090 |
|---|
| Symbol | |
|---|
| ID | 6179749 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria MC40-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010552 |
|---|
| Strand | - |
|---|
| Start bp | 1116055 |
|---|
| End bp | 1116774 |
|---|
| Gene Length | 720 bp |
|---|
| Protein Length | 239 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 641683860 |
|---|
| Product | methyltransferase type 11 |
|---|
| Protein accession | YP_001810771 |
|---|
| Protein GI | 172063120 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 0.860776 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 0.999549 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGTCCT GCCGCGCGCA CGCTCCCGCC TATGTTCCCG AAACCCGCTT CGGCATCTGG
TTTCTTCGCA CGCATACCTG GGAGCATCAC GTGCTTAGGG TGGCCATCGA CGATCTCAAG
CAGCTCATCG GCGCACCCCT GCCAACGGCC CCCGTCATCC TCGATGCGGG ATGCGGCCAG
GGCAAGTCGT TCCGCCTGCT CGGCGAAGCG TTCGCACCCG GCAAAATCAT CGGCATCGAT
TGTCACGACG ACTCGCTCAC GCACGCGGCG GAAGCCGCGC GTCGCTGCGC CACGCCCGTC
GAACTGCATC GTGCGGACTG CACACAGATT CCGCTCGCCG ATTCGAGCGT CGACATCGTG
TTCTGCCATC AGACCTTTCA TCATCTCGTC GACCAGGAGC ATGCGCTGGC CGACTTTCGT
CGCGTACTGA AACCCGGCGG GCTGCTGCTG TTCGCCGAAT CGACCGACGC GTACATCAAG
TCGTGGGTGA TCCGGCTGCT GTTCCGTCAT CCGATGGAAG TTCAGAAAAG TGCCGACGGC
TACCTTGCGA TGCTGCGCGA CGGCGGGTTC ACGTTCGACG CCCGCAATGT GTCGTTCCCG
TACCTGTGGT GGAGCCGCGC GAAAGACTTC GGACTCCTCG AGCGCATCGG CCTGTACGCA
CCGAAGCCGG GCAAGCGCCG CGAGACGCTC GTGAACGTCG CCGCGCGCAA GCCCGCCTGA
|
|---|
| Protein sequence | MTSCRAHAPA YVPETRFGIW FLRTHTWEHH VLRVAIDDLK QLIGAPLPTA PVILDAGCGQ
GKSFRLLGEA FAPGKIIGID CHDDSLTHAA EAARRCATPV ELHRADCTQI PLADSSVDIV
FCHQTFHHLV DQEHALADFR RVLKPGGLLL FAESTDAYIK SWVIRLLFRH PMEVQKSADG
YLAMLRDGGF TFDARNVSFP YLWWSRAKDF GLLERIGLYA PKPGKRRETL VNVAARKPA
|
|---|
| |