| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_3508 |
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| Symbol | |
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| ID | 6179943 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | + |
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| Start bp | 438844 |
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| End bp | 439902 |
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| Gene Length | 1059 bp |
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| Protein Length | 352 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641683277 |
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| Product | AraC family transcriptional regulator |
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| Protein accession | YP_001810191 |
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| Protein GI | 172062540 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.878691 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.0398628 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCTTCT GGGACTTCAC CCGGAGTCCG GCCAGTGCCC GGCTGCTGGT CGATTTCGGC
GACGAGCGCG GCGTGTCGCG CACGAAGCTG CTGGCCGGCA CGGGCCTCGC GGACGCGCAG
CTCGACGATC CGAACGTCGA GGTGACGGCC GCGCAGGAAC TGCGGCTGAC CGGCAATCTG
CTGCGCGCGC TCGGGCGTGC TCCGGGCCTC GGGTTCGAGG TCGGGCAGCG CTATCACTTC
TCCGCCTACG GCGTGTGGGG CTACGGGCTG ATCGCGAGCG CGACCGCGCG CGACGCGCTG
GCGCTCGCGA TGCGCTTCCT GCCGCTCACG TATGCGTTCA CGGTGATCAC GTACCGCGAG
GAATCGCACG CATGCGTGCT CAATTTCGGC GCGCCGGAGC TCGATGCCGA CCTGAGCCGG
TTCCTCGTCG AACGCGACAT GACGGCCGCC GTCGTGCTGC TGCAGGAAAT CGGCGGCGAC
GATTTCGCGT TGTCGCGCTT CACGATGCAG GCCGAGAGCG CGGGGAGCGT AGCCACGTCC
ACACGCGCAC CCGCACCGCG CATTGCCGGT GTCGAACCCG TGTTCGGCGC GCGTGCGAAC
AGTCTCGCGT TCGACCGAGG CTTTCTCGAC CGGCCGCTGC CGCATGCGAA CCCGCTGACG
GTTTCGATGT GCGAGCAGAT GTGCGTCCAG CTGGTCGAGG CGCGGCGCGC GCGGGTCGGC
ACGTCGGAGA TGGTGCGGCA ATACCTGACG GCGACGCCCG GCAACGTGCC GTTCTCGCTC
GACGACATCG CGCGGCTGAT GAACACGAGC CCGCGCACGC TGAAGCGCCG GCTGCAGGAG
GAAGGCACGA CGTTTCGCAC GCTGCTCGCG CAGGCGCGCG GCGCGATGGC CGAGACGCTG
CTCGGCGATG CGCACCTGTC GCTGACGGAA GTCGCCGAGC GGCTCGGCTT CAGCGACCTG
TCGAGTTTCT CGCAGGCGTT CAAGCGCTGG TATGGTGTGC CGCCGGGCAC CTACCGCAGC
GGCCTGCTGC GCGACGGCGC CTGCAACGGC GCCGCGTAA
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| Protein sequence | MSFWDFTRSP ASARLLVDFG DERGVSRTKL LAGTGLADAQ LDDPNVEVTA AQELRLTGNL
LRALGRAPGL GFEVGQRYHF SAYGVWGYGL IASATARDAL ALAMRFLPLT YAFTVITYRE
ESHACVLNFG APELDADLSR FLVERDMTAA VVLLQEIGGD DFALSRFTMQ AESAGSVATS
TRAPAPRIAG VEPVFGARAN SLAFDRGFLD RPLPHANPLT VSMCEQMCVQ LVEARRARVG
TSEMVRQYLT ATPGNVPFSL DDIARLMNTS PRTLKRRLQE EGTTFRTLLA QARGAMAETL
LGDAHLSLTE VAERLGFSDL SSFSQAFKRW YGVPPGTYRS GLLRDGACNG AA
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