| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_3254 |
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| Symbol | |
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| ID | 6180269 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010552 |
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| Strand | + |
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| Start bp | 160984 |
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| End bp | 162021 |
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| Gene Length | 1038 bp |
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| Protein Length | 345 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641683029 |
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| Product | histone deacetylase superfamily protein |
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| Protein accession | YP_001809943 |
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| Protein GI | 172062292 |
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| COG category | [B] Chromatin structure and dynamics
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0123] Deacetylases, including yeast histone deacetylase and acetoin utilization protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.936877 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.964119 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCACGG TCTACAGCAG CGATCACCAT CTGCATCGCG GCGTCGAACT GAAGGACGGC
GCGATCACCG AGTCGTTCGA GAACCCGCTG CGCGCCGAGA CGGTGCTCGC GCAGGTGCGC
GCGGCCGGCC TCGGCGACGT GATCGCGCCG CGCGCGTTCG ACCGCGCGTG CTATGCCGGC
GCGCACAGCG CGCGCTATGT CGCGTTTCTC GCCGGCGCGT GGGACGAATG GACCGCGACC
GGCCGCACCT GCCAGGCGCT GCCGCTCGTG TGGCCGGTGC GCGCGATGCC GTCGTCGGCG
ACGCTGCCCG AGTTCATCGA CGGCAAGCTC GGCTTCTTCG CGATGGACGC CGGCGCGCCG
ATCAACGCCG GCACGTGGGA CGCGGTGAGC GCGAGCGCGA ACTCGGCGCT CACCGGTGCC
GAACTGCTGT CGAACGGCGG CGCGCGCGCG GCGTTCGCGC TGTGCCGCCC GCCCGGCCAC
CATGCGGGCC ACGAGTACAT GGGCGGCTAC TGCTACCTGA ACAACGCGGC GATCGCCGCG
CAGCACGGCA TCGCGAGCGG CGCGGCGCGC GTCGCGGTGC TCGACGTCGA CTTCCACCAC
GGCAACGGCA CGCAGGACAT CTTCTACGAC CGCGCGGACG TGCTGTTCGC GTCGATCCAC
GGCGAGCCGC CGGTGTCGTA TCCGTACTTC TCCGGCTACG CGCACGAGCG CGGCGGCGGC
GCGGGCGACG GCTTCAACCT GAACCTGCCG CTGCCGAAGG GCACGCAGTG GGACGCCTAC
GCGGCGGCGC TCGACCACGC AGCCGCCGCG ATCGCCGCGC ATGCGCCCGA CCTGCTGGTC
GTGTCGCTCG GCGTCGACAC GTTCGAGCAC GACCCGATCA GCCATTTCCG CCTGCGCTCG
CCCGACTACC TGCGCGTCGG CGAAGCGCTC GCGCGCCTGA AGCTGCCGAC GCTGTTCGTG
ATGGAAGGCG GCTACATGGT CGAGGAAATC GGTATCAATG CGGTGAACGT GCTGCTCGGT
TTCGAAGGGC GCGCGTGA
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| Protein sequence | MLTVYSSDHH LHRGVELKDG AITESFENPL RAETVLAQVR AAGLGDVIAP RAFDRACYAG
AHSARYVAFL AGAWDEWTAT GRTCQALPLV WPVRAMPSSA TLPEFIDGKL GFFAMDAGAP
INAGTWDAVS ASANSALTGA ELLSNGGARA AFALCRPPGH HAGHEYMGGY CYLNNAAIAA
QHGIASGAAR VAVLDVDFHH GNGTQDIFYD RADVLFASIH GEPPVSYPYF SGYAHERGGG
AGDGFNLNLP LPKGTQWDAY AAALDHAAAA IAAHAPDLLV VSLGVDTFEH DPISHFRLRS
PDYLRVGEAL ARLKLPTLFV MEGGYMVEEI GINAVNVLLG FEGRA
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