| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_1864 |
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| Symbol | |
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| ID | 6176647 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | + |
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| Start bp | 2081133 |
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| End bp | 2082323 |
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| Gene Length | 1191 bp |
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| Protein Length | 396 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641681623 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_001808562 |
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| Protein GI | 172060910 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.105748 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.00576569 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAGAAAT CTCTCGCCGC ACTCGGCTTC TCGCTGATGC TGCTGTCGTC CGCGGCATTC
GCAGTCCCGT CGCTGCAGCA AGTCGAGCAG TCGATCGCCC AGCGCGACTG GCAACGCGCC
GACTCGCAGC TGTCGCAAGT CATCGACGCC CACCCGAACA ACGCGCATGC GCGCTACCTG
TACGCGCAGG TGCTGGACCG CGAAGGCCGC GCGTCGGACG CGCTCGCGCA ACTGCAGCGG
GCGAAGTCGC TCGATCCGCA ACTGCGCTTC ACCGACGCGT CGCACTTCGC GCAGACCGAA
TCGCGCATTC GCGCGGACGC CGCGCGCGTG AGCGGCAACA CACCGTCGGC CACGCAGGCC
GGCTCGTTGC AGTCGTCGCT CGCGCCGGCC GCGCCGGTCG CGAAACACGG TCCGTCGACC
GGCATGTGGA TCGGCATCGC GCTGATCGTC GCGCTCATCG CGGCGGTGCT GCGCTGGACG
CTGCGGCGCG CGCGCTCGGC CGACGACGGC CGCGCCGACG ACGAACGCCG CACGCAATTG
AAGCGCGCGA CCGACGTGCT GAACGACATT CGTCCGCTGA AACTCGACGC GAAGCTGTCG
ACGGCGCCCG GCGCCGCCGC GCTCACCGGC GAGCTCGAAG GCATCGAGAC CGATGCACGT
ACGCTCGTCG AAACGCTGTC GAACGGCAAG AACCCGGTGC CGCCGTATCG CATCGACGAA
CTCGAGCAGC GGCATGCGAG CGTGAAGGCA CGCGTCGAAG GCCGCCCCGA TCCGGGCGCG
CAGCCCGCCG CGCCGGCGAA CGGCAGCGGC TCCGTGTATG CGCAGGAAGC CGATCGCATG
ACCGGCACGC AAGGCCAGCC GTATCAGCAA CCGCCATACC CGCAACAGCC GTATCCCCCG
CAACCGTATC CGCAACAGCA GCCGCCCGTC GTGGTCCAGC AAGGCGGCGG TTTCGGCGGC
GGGATGGGCG GGCTGCTGAC CGGCGTGCTG CTCGGCGAAG CGATGTCGGG CGGGCGCGAG
CGCGTGGTCG AGCGCGACGT GATCGTCGAC GACCAGCGCC GGCGCCAGGA GAACAACGAT
CCGGGCTTCG ACTTCGGTCG CGGCGACGAT TCGAACTGGA GCGACGGCAA CGGCGGCGGC
GGCGTCGATC TTGGCAGCAA CGACGACGGC TGGACCGACG ACAACACCTG A
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| Protein sequence | MKKSLAALGF SLMLLSSAAF AVPSLQQVEQ SIAQRDWQRA DSQLSQVIDA HPNNAHARYL
YAQVLDREGR ASDALAQLQR AKSLDPQLRF TDASHFAQTE SRIRADAARV SGNTPSATQA
GSLQSSLAPA APVAKHGPST GMWIGIALIV ALIAAVLRWT LRRARSADDG RADDERRTQL
KRATDVLNDI RPLKLDAKLS TAPGAAALTG ELEGIETDAR TLVETLSNGK NPVPPYRIDE
LEQRHASVKA RVEGRPDPGA QPAAPANGSG SVYAQEADRM TGTQGQPYQQ PPYPQQPYPP
QPYPQQQPPV VVQQGGGFGG GMGGLLTGVL LGEAMSGGRE RVVERDVIVD DQRRRQENND
PGFDFGRGDD SNWSDGNGGG GVDLGSNDDG WTDDNT
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