| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_0161 |
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| Symbol | |
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| ID | 6176298 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | + |
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| Start bp | 191381 |
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| End bp | 193177 |
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| Gene Length | 1797 bp |
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| Protein Length | 598 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641679896 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_001806878 |
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| Protein GI | 172059226 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG3914] Predicted O-linked N-acetylglucosamine transferase, SPINDLY family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGATC TCACGCTGTC CGACTCCCCC GTCGCCACGA TCGAAGCGGC GCTGGCGCTC
CACCAGGCCG ACCGGCTCGA GGAAGCCGAG ACGCTGTACC GCCGGATCCT CGACGCAGAT
CCGCGGCACG CGGACGCGCT GCACCTGCTC GGCCTGATCG GTCACCAGTA CGGGCGGTAT
CACGAGGCGA CGGAACTGAT CATGGCGGCG ATCGAGATCA AGCCCGACGC GACCTACTAC
TACAACCTCG GCAACGTGAT GCAGGCGAAC AACCGCCCGG CCGCCGCCGC CGAGTGTTTC
CGCCTCGCGA TCGAGCTGCG GCCCGGCTAC GTCGACGCCT ATAACAATCT CGGCAACGCG
CAGCGGCTCG CGGGCCATGC ACGCGAGGCC GTCGACGCGT TCTGCCAGGT GATCGCGCTG
CAGCCCGACC ACGGGCAGGC CTACAACAAC CTCGGCAACG CGCTGCTCGA CCTGAACGAG
ATCCCGGCCG CGCTCGAGGC ATACCAGCAC GCGGTCGCGC TGCGTCCGGA ACTGCCGGAG
CCGCGCAGCA ACCTGCTGTT CGCGTACCAC TACAGCGACG CGTTCGACCC GCACGCGTAC
CTCGACGAAG CCGCGCGCTT CGATGCGCTC GTCACGCAGC GCGCGCAGCC GTACTCGACG
TGGCGGGTCG ACCTGAGCGC GCGCATCGGG CGGCCGCTGC GCGTGGGCAT CGTGTCGGGC
GACCTGAAGG CGCACCCGGT CGGCTACTTC ATCGAAGGGA TGCTCGCGCA CGTGAAGCGC
GAGCGCGTCG AACTGCATGC GTATCCGACG CGCGAGATCG AGGACGACGT GACCGCGCGC
ATCAAGCCGC GCTTCGCGTC GTGGACGTGT GTCGCCGGCC TCGACGACGC GGCGGCTGCC
GCGCGTATTC ACGACGACGG CATCGACGTG CTGATCGACG CGTCCGGTCA TACGATTCAC
AACCGCCTGC CGCTGTTCGC GTGGAAGCCC GCGCCGCTAC AGGTGAGCTG GCCCGGTTAC
TTCGCGAGTA CCGGCATGCG CGTGATCGAC TACGTGCTCG GCGACCGCCA CGTGATGCCG
GCCGACGAGG CCGCGCATTT CGTCGAACGC GCGTGGCACC TGCCCGACAG CTACTTGTGC
TTCACGCCGC CGGCCGTCGA GCTCGACTGC GGCCCGCTGC CGATGCTCGC GAACAGTTAT
CCGACGTTCG GCTATTTCGG CAAGCTCGCG AAGCTCACCG ATCGCGTGAT CGACGTGTGG
TCGCGCGTGC TGCGCGATGT GCCGAACGCA CGGCTGTTCG TGAAGGCGCC GCATCTCGAC
GATCCGCGCG AGCAGGACGC GCTCGCGGCC CGCTTCGCCG CGCACGGCAT CGACGCGGCG
CGTCTGCTGT TCGAAGGACG GTCGCCACGC GACGAATATC TGGCGGCCTA CCGGCGCGTC
GACCTGATGC TGAGCCCGTT CCCGTACCCG GGCGGCACGA CGACGGCCGA GGCGCTGTGG
ATGGGCGTGC CGGTGCTCGG CCGCCGCGGC GCGCGGTTCC TGTCGCATAT CTGCGAAAGC
CTGCTGCACG CGGCGCGCCT GCCCGAATGG ATCGCGGACG ACGAAGACAC GTATGTCGCG
AAGGCCGTCG CGTTCGCGCG CAATCCGGCC GAGCTGGCCG TGCTGCGCAC GACGCTGCGT
GCGCAGGTGC TGGCGTCGCC GTTGTGCGAC GCGCCCCGCT TCGCGCGTCA TTTCGAGGAG
GCGCTGCACG AAATGTGGGT GCGCCGCGTC GACGCCGCAC CGGGAGCCGC AGCGTGA
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| Protein sequence | MTDLTLSDSP VATIEAALAL HQADRLEEAE TLYRRILDAD PRHADALHLL GLIGHQYGRY
HEATELIMAA IEIKPDATYY YNLGNVMQAN NRPAAAAECF RLAIELRPGY VDAYNNLGNA
QRLAGHAREA VDAFCQVIAL QPDHGQAYNN LGNALLDLNE IPAALEAYQH AVALRPELPE
PRSNLLFAYH YSDAFDPHAY LDEAARFDAL VTQRAQPYST WRVDLSARIG RPLRVGIVSG
DLKAHPVGYF IEGMLAHVKR ERVELHAYPT REIEDDVTAR IKPRFASWTC VAGLDDAAAA
ARIHDDGIDV LIDASGHTIH NRLPLFAWKP APLQVSWPGY FASTGMRVID YVLGDRHVMP
ADEAAHFVER AWHLPDSYLC FTPPAVELDC GPLPMLANSY PTFGYFGKLA KLTDRVIDVW
SRVLRDVPNA RLFVKAPHLD DPREQDALAA RFAAHGIDAA RLLFEGRSPR DEYLAAYRRV
DLMLSPFPYP GGTTTAEALW MGVPVLGRRG ARFLSHICES LLHAARLPEW IADDEDTYVA
KAVAFARNPA ELAVLRTTLR AQVLASPLCD APRFARHFEE ALHEMWVRRV DAAPGAAA
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