Gene BamMC406_0069 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_0069 
Symbol 
ID6176788 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010551 
Strand+ 
Start bp79647 
End bp80285 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content67% 
IMG OID641679804 
ProductMarR family transcriptional regulator 
Protein accessionYP_001806787 
Protein GI172059135 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.373152 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGAAG GCGTTTACGG GAATCAGGCT TCGGGACGTG TGACCCACAG CTTGCTGCGA 
TTGAGTACGG CCATGCGAAG CCAGGCATGG GATTGGGCGG AAGGCGCGGG TCTCACGCCG 
ACGCAGGGCG AGATCCTCGT GCTGCTGCTG CAACGCAAGG GCCCGATGCG GCTCGGCGAG 
ATCGCGCGCG AGACGCAGCT CACCGCGGCG ACCACCAGCG ACGCGGTCAG CACGCTCGAG 
ACGAAGGGGC TCGTCGAGAA GCGTCGCGCA CTGGACGATG GCCGCGCGCT CGCCGTGCGC 
CTGTCGGCCC GCGGCCGTAC CGCGGCGAAG AAGGCGCTGC AATGGCCGGA ATTCCTGACG 
AAAGCAGTCG GCAAGCTCGG CGCGGACGAG CAGGGCGCGC TGTACCGCGC ACTGCTGAAG 
ACGCTGCGCG AACTGCAGGT GGCCGGCGCG ACGCCGCCGC AGCGCATGTG CCTGACGTGC 
ACGCATTTGC AGCCGGGCAA GCCGTCGAAG AAGACCGTGC ATCACTGCGC GGCGCTCGAC 
CTGTCGATGA CCGACAGCGA TCTGCGTCTC GACTGTTCGG TGCACGAAGA AGCCGACGCG 
GCCACGCAAA AGAAGACCTG GAAGGTATTC GCCGGCTGA
 
Protein sequence
MSEGVYGNQA SGRVTHSLLR LSTAMRSQAW DWAEGAGLTP TQGEILVLLL QRKGPMRLGE 
IARETQLTAA TTSDAVSTLE TKGLVEKRRA LDDGRALAVR LSARGRTAAK KALQWPEFLT 
KAVGKLGADE QGALYRALLK TLRELQVAGA TPPQRMCLTC THLQPGKPSK KTVHHCAALD 
LSMTDSDLRL DCSVHEEADA ATQKKTWKVF AG