Gene Pnec_1646 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnec_1646 
Symbol 
ID6183189 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. necessarius STIR1 
KingdomBacteria 
Replicon accessionNC_010531 
Strand- 
Start bp1445394 
End bp1446266 
Gene Length873 bp 
Protein Length290 aa 
Translation table11 
GC content44% 
IMG OID641672164 
ProductMethyltransferase type 11 
Protein accessionYP_001798334 
Protein GI171464221 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.735409 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones70 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGTAAAAG TTGTTCGCAA ATGGATTGAA AAATGTTCTC TGAAAATCGC ATGGGGTGCT 
GAGTATGCTG AGCCAATGAC CCAGCCCATC AGATGGTTAC AAGATGAAAT TGCAGACCGT 
ATGCTGCAGA AATTGGACAT CGTTAAGCTC GATGTAAAAG ATGTCTTGAT GGTTCCAGAC 
TTTGCTGGAA AACATTTGGA TGTTCTTGCC AAGCGGAACC CTAAGGCGCG GATATTAAGC 
ATCTCTGATG AGGGTGTTTC CAGTTTTCAG ATGTGGCGCG CTAAGGCCAT GAGCAATTGG 
AGATCATTAT TTAACAGCAA TGTAAGTCCA TTGGCGAGTT ACACATCGTC TGGAAGATTT 
GATATCCCTG ATAATTCTGT TGATTTGGTT TTTAGTGATC TCCTGTTGCA GGATCTTGCA 
GACCCAAAAC ATTTCTTGCG AGAGTGTTGG CGCGTATTGC GTGAGGGCGG TTTAATCACG 
TTTAGCTACC TAGGGCCAGA TACTGGCAAA GAATTGCGTT CGATAGTTAT GCCGGAATTA 
AAGCCCCAGA ATTTATTAAG CCCTTGGGAT ATGCACGACA TGGGAGATGC ACTGCTTTCT 
GAGCGTTTTT CAGAACCAGT GATGGATATG GAGTATTTGA CTTTGGATTA CGAGAAGTCG 
GCTCTATTGC TGGCGGATGC CAGCGCTCTC AAATTAATAG TTTCTGCCTC TCCCGAAATT 
ACTGAATTGA GTGCTTTGCC TCAAAAACTC ACCTTAGAAG TGGTTTACGG TCACGCTTGG 
GTCGCTGGAA AGCGCCTAGC AAAAGTAAAA GACAACGTCG CCTATATTGA TCTAAATCAA 
ATTGGACGCA AGACTAGGCC AGATTATGCT TAA
 
Protein sequence
MVKVVRKWIE KCSLKIAWGA EYAEPMTQPI RWLQDEIADR MLQKLDIVKL DVKDVLMVPD 
FAGKHLDVLA KRNPKARILS ISDEGVSSFQ MWRAKAMSNW RSLFNSNVSP LASYTSSGRF 
DIPDNSVDLV FSDLLLQDLA DPKHFLRECW RVLREGGLIT FSYLGPDTGK ELRSIVMPEL 
KPQNLLSPWD MHDMGDALLS ERFSEPVMDM EYLTLDYEKS ALLLADASAL KLIVSASPEI 
TELSALPQKL TLEVVYGHAW VAGKRLAKVK DNVAYIDLNQ IGRKTRPDYA