Gene Lcho_3132 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLcho_3132 
Symbol 
ID6160482 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameLeptothrix cholodnii SP-6 
KingdomBacteria 
Replicon accessionNC_010524 
Strand- 
Start bp3459317 
End bp3459862 
Gene Length546 bp 
Protein Length181 aa 
Translation table11 
GC content66% 
IMG OID641665907 
Productformaldehyde-activating enzyme 
Protein accessionYP_001792157 
Protein GI171059808 
COG category[S] Function unknown 
COG ID[COG1795] Uncharacterized conserved protein 
TIGRFAM ID[TIGR03126] formaldehyde-activating enzyme 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones67 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCAGC CCCGTGCCTT GCCGTACACC TTCCACGCCG GCGAAGCCAC CGTGCTCGCT 
GCCGACGGCC AGTTCACCGA CGCCATGCCC GAGATCCTGA TCGGCCGCGT CGACGGCCCG 
GTGGGCCAGG CGTTTGCCAA CATGATGGCG CAGAGCAAGG GCCACACCGC GATGTTCGCG 
ATCCGCGCCT GCAACCAGCT GGTGCGCCCG GCCACCATCA CCGTGCCCAA GGTGACGCTC 
AAGGACATGG CCAACGTCGA GCTGTTCGGT GGCGTGGTGC AGAGCGCCAC GGCGGACGCG 
GTGATCGACA GCGTGATCGA CGGCGTGATC CCGAAAGAGC TGGCCAACGA GCTGTGCATC 
GTCAGCCTGG TGTGGATCGA CCCGCGCTGC GCCAAGGATC CGAACCTCGA CAAGAAGGAC 
ATGTACCGCA CCAACTACGA GGCCACCAAA CTCGCCATCA AGCGCGCTCT GGCCGACGAG 
CCGTCGATCG ACGAGCTGAT CGCCAACCGG CAGACCATCA AGCACGACAT GGACGACTGG 
AGCTGA
 
Protein sequence
MTQPRALPYT FHAGEATVLA ADGQFTDAMP EILIGRVDGP VGQAFANMMA QSKGHTAMFA 
IRACNQLVRP ATITVPKVTL KDMANVELFG GVVQSATADA VIDSVIDGVI PKELANELCI 
VSLVWIDPRC AKDPNLDKKD MYRTNYEATK LAIKRALADE PSIDELIANR QTIKHDMDDW 
S