| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_2417 |
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| Symbol | |
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| ID | 6163791 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 2623979 |
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| End bp | 2624794 |
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| Gene Length | 816 bp |
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| Protein Length | 271 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 641665187 |
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| Product | HpcH/HpaI aldolase |
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| Protein accession | YP_001791447 |
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| Protein GI | 171059098 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2301] Citrate lyase beta subunit |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.21523 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCGCCGC GCACCTACCT GTTCGTGCCC GGCAATCGCC CCGAGCGATT CGGCAAGGCG
TTTGCCAGCG GCGCCGACGC GGTGGTGCTG GACCTGGAGG ACGCCGTGGC GCCCGAGGCC
AAGGGCGCGG CGCGCGCAGC GATCGCCGAA TGGTCCGGCC AGGCGAGCGC CGATCAGCGC
GCACGCGCCG TGCTGCGCAT CAACGACGCG GCATCACCGC ACTTCGCCGA CGACCTGAGC
CTGTCGCGCA ACGCCGGCCT CGGCGCGCTG ATGCTGCCCA AGGCCGAGTC GCCCGATCAG
ATCCACGCGG TGCGCGCGGC GGTGGGCGGC GCGCAGGTGC TGGCGCTGAT CGAAAGCGCC
CGCGGCGTGG CGAACGTCGA CGCCATCGCG GCGAGCGAGG ACGTGCGGCG GCTGGTCTTC
GGCACGCTCG ATTTCGCGCT CGATCTCGAC CTCGACATCA GCGAGCAGCC CGACGCGCTG
GCCCATGCTG CCAGCCGGCT GGCGATCGCC TCGCGCGTCG CCGGGCTGGC CGCGCCGGTG
GCCGGCGTCA CGCCGCAGAT CGACGACGAA GCCCGGCTGC TGGCCGACCT GGCCTGGGCG
CGGCGCTTCG GTTTCGGCGC CAAGCTGTGC ATCCATCCGA CGCAGGTCGC GGCCATCCAC
GCCGCGCTGG CACCGAGCCC GCAGGCGCTC GACTGGGCGC GGCGGGTGCT CGCCGCCGAA
GCCGCATCAC CCGGCGCCGC CCGGCTCGAC GGCCGAATGA TCGACCGCCC GGTGGTGCTG
CAGGCGCAGC GCACGCTGCA GCGCGCCGGC CACTGA
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| Protein sequence | MAPRTYLFVP GNRPERFGKA FASGADAVVL DLEDAVAPEA KGAARAAIAE WSGQASADQR
ARAVLRINDA ASPHFADDLS LSRNAGLGAL MLPKAESPDQ IHAVRAAVGG AQVLALIESA
RGVANVDAIA ASEDVRRLVF GTLDFALDLD LDISEQPDAL AHAASRLAIA SRVAGLAAPV
AGVTPQIDDE ARLLADLAWA RRFGFGAKLC IHPTQVAAIH AALAPSPQAL DWARRVLAAE
AASPGAARLD GRMIDRPVVL QAQRTLQRAG H
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