| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_2406 |
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| Symbol | |
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| ID | 6161418 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 2612601 |
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| End bp | 2613227 |
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| Gene Length | 627 bp |
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| Protein Length | 208 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641665176 |
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| Product | phenylacetic acid degradation protein PaaY |
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| Protein accession | YP_001791436 |
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| Protein GI | 171059087 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0663] Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily |
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| TIGRFAM ID | [TIGR02287] phenylacetic acid degradation protein PaaY |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 0.572897 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCCCTGTT ATTCGATCGA CGGCGTGGTG CCGGTGGTGC ACCCGAGCGC GCATGTGCAC
CCGACCGCCG TGCTGATCGG CGACGTGATC GTCGGCCCCG GCGCCTACAT CGGCCCGCTG
GCCAGCCTGC GCGGCGACTT CGGCCGCATC GTCATCGAAG AAGGTGCCAA CGTGCAGGAC
ACCTGCGTGA TGCACGGCTT CCCCGGCAGC GACACCGTCG TCGAGGTCAA CGGCCACATC
GGCCACGGCG CGGTGCTGCA CGGCTGCGTG GTGCGGCGCG ACGCGCTGGT CGGCATGAAC
GCGGTGATCA TGGACGAGGC CGAGGTCGGC GAAGCGACCA TCGTGGCCGC CTGCGCCTTC
GTGCGCGCCG GCGTCAAGCT GCCACCGCGC TCGCTGGTGG CGGGCCTGCC GGCCAAGGTG
ATCCGGCCGC TGAGCGACGA CGAGATCGCC TGGAAACGCG AGGGCACCGC CGTCTACCAG
GACCTGACGC GGCGCTGTCT GGCCAGCTTG CACGAGGTGC AGCCGCTCGC GGAGGTCGAG
TCCGACCGCC CACGGGTGCC GGCGCCGGAT GTGAAGTCGC TGATCGCGAC GCGACGCGAC
GGTGCTGCGG ACCCCTCAAC GCCCTGA
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| Protein sequence | MPCYSIDGVV PVVHPSAHVH PTAVLIGDVI VGPGAYIGPL ASLRGDFGRI VIEEGANVQD
TCVMHGFPGS DTVVEVNGHI GHGAVLHGCV VRRDALVGMN AVIMDEAEVG EATIVAACAF
VRAGVKLPPR SLVAGLPAKV IRPLSDDEIA WKREGTAVYQ DLTRRCLASL HEVQPLAEVE
SDRPRVPAPD VKSLIATRRD GAADPSTP
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