| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lcho_2153 |
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| Symbol | |
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| ID | 6161451 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Leptothrix cholodnii SP-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010524 |
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| Strand | + |
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| Start bp | 2355173 |
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| End bp | 2356387 |
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| Gene Length | 1215 bp |
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| Protein Length | 404 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641664921 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001791184 |
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| Protein GI | 171058835 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4134] ABC-type uncharacterized transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.0000427732 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCTCGATC GCCGTCAATT CACCCTCCTG AGCCTCGGCT CGCTCGCACC GGCCTGGGCC
GCCGCCCAGG CCGGTGCGCC CTGGAACGAG GTGCTCGCCA AGGCGCGTGG CCAGACCGTC
TACTGGAACG CCTGGGCCGG CGACGAGAAG ATCAACGCCT TCATCGCCTG GGTCGGCGAG
CAGGTCAAGG CGCGCCATGG CGTCACGCTG CAGCATGTGC GGCTCAAGGA CACCGCCGAG
GCCGTGACCC GCGTGATCGC CGAGAAGTCC GCCGGCCGCA GCCGCGACGG CTCGGTCGAC
CTGATCTGGA TCAACGGGCC CAACCTGCTG GCCATGAAGC AGCAGGGTCT GCTCCACGGC
CCGGTGACGC AGGCGCTGCC CAACTACCGC TGGGTCGACA CGGTCAACAA GCGCTCCAAC
GTGATCGACT TCACCACCCC GGTCGACGGC CTGGCGGTGC CCTGGCGCAT GGCGCAGGTG
GTGTTCGTCT ACGACTCGGC GCGCATCCGC AACGCCACCG AGGTGCCACG CTCGGCCGCT
GCGCTACTCG ACTGGGCGCG CCGGCACCCG GGGCGGCTGA CGCACCCGGA CGTCAGCAAC
TTCCTGGGTT CGACCTTTCT CAAGCAGGCG CTGCTCGACC TGACGGCCGA TCCGGCGGTG
CTGCAACGCC CGGCCACCGA CGCCAACTTT GCGCAGGTCA CGGCACCGTT GTGGGCCTGG
TACGACCAAC TGCGGCCGAC CCTCTGGCGC CGCGGCGAGC AGTTCCCCGA CAGCGGCCCG
GCGCAGCGCC AGCTGCTCAA CGACGGCGAG ATCGACATCA CGCTCTCGTT CGACCCGGCC
GAGGCGGCGG TGTCGGTGCA GGCCGGCCTG CTGCCGCCGA GCGTGCGCAC CTTCACCTTC
AGCAAGGGCA CGATCGGCAA CACCAGTTTC GTGGCCATCC CCTACAACGC CCGCAGCAAG
GAGGGCGCGC TGGTGGTCGC CAACTTCCTG CTCGAACCCG CCACCCAGGC GCGCGCGCAG
GACATCGCGC AGACCGGCGC CTTCAACGTG CTCGACCTGT CGCGACTCGG TGCGGCCGAG
CGTGCGCATT TCGATCGCCT CACGCCCAGC GCGGCCCTGC CCAGCGCCGC CGAACTCGGC
GTGCCGCAGC TCGAACCGCA TGCCTCGTGG ATGACGCGCA TCACGGCCGA ATGGCAGAAG
CGCTACACCC GCTGA
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| Protein sequence | MLDRRQFTLL SLGSLAPAWA AAQAGAPWNE VLAKARGQTV YWNAWAGDEK INAFIAWVGE
QVKARHGVTL QHVRLKDTAE AVTRVIAEKS AGRSRDGSVD LIWINGPNLL AMKQQGLLHG
PVTQALPNYR WVDTVNKRSN VIDFTTPVDG LAVPWRMAQV VFVYDSARIR NATEVPRSAA
ALLDWARRHP GRLTHPDVSN FLGSTFLKQA LLDLTADPAV LQRPATDANF AQVTAPLWAW
YDQLRPTLWR RGEQFPDSGP AQRQLLNDGE IDITLSFDPA EAAVSVQAGL LPPSVRTFTF
SKGTIGNTSF VAIPYNARSK EGALVVANFL LEPATQARAQ DIAQTGAFNV LDLSRLGAAE
RAHFDRLTPS AALPSAAELG VPQLEPHASW MTRITAEWQK RYTR
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