Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Lcho_1966 |
Symbol | |
ID | 6163833 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Leptothrix cholodnii SP-6 |
Kingdom | Bacteria |
Replicon accession | NC_010524 |
Strand | - |
Start bp | 2132014 |
End bp | 2133288 |
Gene Length | 1275 bp |
Protein Length | 424 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641664735 |
Product | hypothetical protein |
Protein accession | YP_001790998 |
Protein GI | 171058649 |
COG category | [R] General function prediction only |
COG ID | [COG4637] Predicted ATPase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTCCGT CCCCCCGTCT CCCCGCGAAG AAGCCCGGCG GCATGGCCCG CATCGAATAC CTCAAGGTGC AGAACTTCCG CGCTCTGCAC GATGTCGAGT TCAAGGACCT GACGCCGCTG ACGGTGCTGC TCGGGCCCAA TGGCAGCGGC AAGTCCACGG TATTCGACGT CTTTGCCTTC CTGGCCGAGT GTTTCGAGTT GGGGCTGCGC AAGGCTTGGG ACAAACGTGG CCGGGCCAAG GAGTTGAAGA CCCGCGGCGC AGAGGGCCCG GTGTCGGTGG AGATCAAGTA CCGCGAACCG GGCTTTCCCC TCATCACCTA CCACCTCGCA GTCGACGAAC GCAACGGGGT GCCGGTCGTG GTTGAGGAGT GGCTGCGCTG GACACGTGGC AAGGGCGGCA AACCGTTCCG CTTTCTGGAC TACCGGCAGG GCGTGGGCCA GGCCGTCAGC GGCGAGTTGC CCGATGAACA AGACCGGCGG GTGGACATCC CGCTGAAGTC GCCCGACCTG CTGGCCGTGA ACGCGCTGGG CCAGTTTGCC GAGCATCCGC GTGTGGCGGC GCTGCGCGAG TTCATCACCG GCTGGCATGT GTCCTACCTG GCGGCAGACA GTGCCCGCGG GCAACCCGAG GCCGGACCGG AAGAGCACCT GACCAAGACC GGAGACAATC TGCCCAACGT CATCCAGTAC CTGGGCGAGC GCCATGCCGA GCGGCTGGAG CACATCGTCG ACGTGCTGCG GCAACGGGTG CCGCGCATCG AGCGCGTGCT GGCGGACCCG ATGCCCGATG GCCGCCTGCT GCTGCAGATC AAGGACACCC CCTTCAGCCA CCCGGTGCTG GCCCGCTTTG CGTCCGACGG CACGCTGAAG ATGTTGCAGT ACCTGGTGCT GCTGCACGAT CCGGCACCAC CGCCGTTCAT CGGCATCGAG GAGCCGGAGA ACTTCCTGCA CCCACGGATG TTGCTGGATC TGGCCGAGGA ATGCCGCAAG GCCACCGAGC AGACCCAGCT GATGGTGACG ACACATTCGC CTTTCTTCGT GAACGCCTTG CGGCCGGATG AGGTGCGCGT TCTGTGGCGG GACGAGGCCG GCTACACCCA GGTGATGCGG GCGTCCGATC TGCCCGGCAT CACGGCATTC ATCGAGCAGG GGGCCCTGCT CGGCCATCTG TGGATGGAAG GTCAGTTGGG CGTTGGCGAC CCCCTCGTCA ATCAGGGCGC ACCGACGCGC CCCCTGAGGC GCCCAGCTGC CACGGTCAGC CGGAAGAAGG GTTGA
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Protein sequence | MSPSPRLPAK KPGGMARIEY LKVQNFRALH DVEFKDLTPL TVLLGPNGSG KSTVFDVFAF LAECFELGLR KAWDKRGRAK ELKTRGAEGP VSVEIKYREP GFPLITYHLA VDERNGVPVV VEEWLRWTRG KGGKPFRFLD YRQGVGQAVS GELPDEQDRR VDIPLKSPDL LAVNALGQFA EHPRVAALRE FITGWHVSYL AADSARGQPE AGPEEHLTKT GDNLPNVIQY LGERHAERLE HIVDVLRQRV PRIERVLADP MPDGRLLLQI KDTPFSHPVL ARFASDGTLK MLQYLVLLHD PAPPPFIGIE EPENFLHPRM LLDLAEECRK ATEQTQLMVT THSPFFVNAL RPDEVRVLWR DEAGYTQVMR ASDLPGITAF IEQGALLGHL WMEGQLGVGD PLVNQGAPTR PLRRPAATVS RKKG
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