| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xfasm12_1873 |
|---|
| Symbol | |
|---|
| ID | 6121594 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xylella fastidiosa M12 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010513 |
|---|
| Strand | - |
|---|
| Start bp | 1954584 |
|---|
| End bp | 1955039 |
|---|
| Gene Length | 456 bp |
|---|
| Protein Length | 151 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 641649835 |
|---|
| Product | translation initiation inhibitor |
|---|
| Protein accession | YP_001776385 |
|---|
| Protein GI | 170730952 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0251] Putative translation initiation inhibitor, yjgF family |
|---|
| TIGRFAM ID | [TIGR00004] endoribonuclease L-PSP, putative |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 0.595446 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTGAGAT TGCTGGCTCT TGAGCGGGCA CCGATACAAT GCACTTTTAT TTTCCATCGA
CTCCACATTC AAATGTCCTT CCAGATCATC CATACCGAAA AAGCGCCGGC TGCGATCGGC
CCGTATTCTC AGGCCGTGCG TGTTGGCAAC ACCGTGTATT TTTCAGGCCA GATTCCATTG
GATCCAGCCA CCGGTACTAT TGTCGCTGGC GACCTCGCGG TCCAAGCCCG TCGTGCATTT
GATAACCTCA GAGCAGTTGC TGAGACTGCT AACGGCTCCC TCTCCAAAAT CGTCCGTTTA
GGGCTTTACC TGACTGACTT GGAGCAATTT TCTGTGGTCA ATGCGGTGAT GCAGGAATAC
TTTCAGGACC CATTCCCAGC ACGCTCCACC ATTCAGGTCT CCGGTTTACC CAAGGGCGCG
GATTTCGAGG TGGATGCAGT GATGGTGATT GACTGA
|
|---|
| Protein sequence | MLRLLALERA PIQCTFIFHR LHIQMSFQII HTEKAPAAIG PYSQAVRVGN TVYFSGQIPL
DPATGTIVAG DLAVQARRAF DNLRAVAETA NGSLSKIVRL GLYLTDLEQF SVVNAVMQEY
FQDPFPARST IQVSGLPKGA DFEVDAVMVI D
|
|---|
| |