Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | M446_3004 |
Symbol | |
ID | 6128994 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium sp. 4-46 |
Kingdom | Bacteria |
Replicon accession | NC_010511 |
Strand | + |
Start bp | 3323172 |
End bp | 3324008 |
Gene Length | 837 bp |
Protein Length | 278 aa |
Translation table | 11 |
GC content | 76% |
IMG OID | 641643195 |
Product | lytic transglycosylase catalytic |
Protein accession | YP_001769850 |
Protein GI | 170741195 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.210468 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTGTCGC CCGGCCCGGA CACGACCATG CGGCCCCTCA GGCCCACGAG CCTGCGCGCC TACCGGGCCC GGGTGACCCG GAGCGCCCTC GTCCGGGTCG CGGTGCGAAC CGTCGCGGGC CGGAGACTCG CCCTCTCCGG CGCGCTCGCC GCGGCGCTGC TGCTCACCGC GCCGGGCGTG CTGCCCGGCG AGGACGGCGT GCAGCCGGCC ATCGCCCTGG CGGCCCCTCG CCCCGCCCCC GCCCCCGCCG TGCCGCGCAT CGCGCGGGAG ACCGGCCCGG GCGGCCCCGC CCACGCCTAT GTGAGCCGCG CCCACGCGGC GACCGCGGAT GCCCCGCCCT CCCCGCTCGC CGTCTCGACC ATCGCCGACG CGTGGTCGGC GGCCTTCTTC GGCGACCGCG AGCGCGTGAC CGCGTACATC GCGGATGCCG CGCTGGCCCA CGATCTGCCG GCGGAGTTCC TGCTGCACCT GTTGAAGCAG GAGAGCGGCC TGAACCACCA GGCGGTCAGC CGGGCGGGCG CCCTCGGCAT CGCCCAGTTC ATGCCGGCCA CGGCCGGCGA GCGCGGCCTC GTCGACCCGT TCGATCCCTT CGAGGCGATC CCGAAATCGG CGGAGCTGCT GCGGGAATTC CGGACGCAGT TCGGCAATCT CGGTCTGGCA GCGGCGGCCT ACAACGCCGG ACCCCGGCGG GTGCGCGATT GGCTGGCCGG TCGCTCCTCC CTTCCGGCGG AGACGCGCAA CTACGTCGTG CGGATCACCG GCCGGACGAT CGAGGAATGG AGAGTGCGCG GGGATCTCGT CGGCTTCGCC GACCCGATGC CGCGTCGCGG GTCCTGA
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Protein sequence | MVSPGPDTTM RPLRPTSLRA YRARVTRSAL VRVAVRTVAG RRLALSGALA AALLLTAPGV LPGEDGVQPA IALAAPRPAP APAVPRIARE TGPGGPAHAY VSRAHAATAD APPSPLAVST IADAWSAAFF GDRERVTAYI ADAALAHDLP AEFLLHLLKQ ESGLNHQAVS RAGALGIAQF MPATAGERGL VDPFDPFEAI PKSAELLREF RTQFGNLGLA AAAYNAGPRR VRDWLAGRSS LPAETRNYVV RITGRTIEEW RVRGDLVGFA DPMPRRGS
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