Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | M446_0867 |
Symbol | |
ID | 6129200 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium sp. 4-46 |
Kingdom | Bacteria |
Replicon accession | NC_010511 |
Strand | - |
Start bp | 975098 |
End bp | 975829 |
Gene Length | 732 bp |
Protein Length | 243 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641641179 |
Product | pyrimidine 5'-nucleotidase |
Protein accession | YP_001767853 |
Protein GI | 170739198 |
COG category | [R] General function prediction only |
COG ID | [COG1011] Predicted hydrolase (HAD superfamily) |
TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED [TIGR01993] pyrimidine 5'-nucleotidase |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.652613 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTTCCTTC CGAGCGAGAG CCACCTCACC GCCCCGGACG CCCGCGGCTT TTCCGGTGTC GAGACCTGGG TCTTCGACCT CGACAACACG CTCTACCCGC ACGAGGCCCG CGTCTGGCCC CAGGTCGACG AGCGCATCAC CCTCTACGTG ATGGATCTGT TCGGGCTCGA CGGGCTCTCG GCGCGCGCCC TGCAGAAGCA CTTCTACCAC CGCTACGGGA CGACCCTGCG GGCGCTGATG CAGGAGGAGG CGGTCGATCC CTACGACTTC CTCGACTTCG CCCACGACAT CGACCATTCG GGCATCGCCC TCAACCCGGC CCTCGGCCGG GCGATCGAGG CCCTGCCGGG CCGCAAGCTC ATCCTCACCA ACGGCTCGCG CCGGCACGCC GAGAACGTGG CGCGCAAGCT CGGCATCCTC GACCATTTCG AGGACGTGTT CGACATCGCG GCCTCCGACT TCGTGCCCAA GCCCGAGCGG CGGGCCTACG AGACCTTCCT CGACCGGCAC GCGGTCGATC CGACCCGCGC GGCCCTGTTC GAGGACATCG CCAAGAACCT CGTCGTGCCC CACGACCTCG GCATGGCGAC GGTGCTGGTG GTGCCGCGCA CGGTCGATCC GTTCCGGGAC GCGTCCGAGC AGGAGGCGGT GCGGGCCCCG CACATCGACC ACATCACCAA CGACCTCGCG GGCTTCCTGA GCGAGCGGGT CGCCCCGGCG CTGCCCCGGT GA
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Protein sequence | MFLPSESHLT APDARGFSGV ETWVFDLDNT LYPHEARVWP QVDERITLYV MDLFGLDGLS ARALQKHFYH RYGTTLRALM QEEAVDPYDF LDFAHDIDHS GIALNPALGR AIEALPGRKL ILTNGSRRHA ENVARKLGIL DHFEDVFDIA ASDFVPKPER RAYETFLDRH AVDPTRAALF EDIAKNLVVP HDLGMATVLV VPRTVDPFRD ASEQEAVRAP HIDHITNDLA GFLSERVAPA LPR
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