| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mrad2831_6332 |
|---|
| Symbol | |
|---|
| ID | 6141902 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium radiotolerans JCM 2831 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010509 |
|---|
| Strand | + |
|---|
| Start bp | 28989 |
|---|
| End bp | 30131 |
|---|
| Gene Length | 1143 bp |
|---|
| Protein Length | 380 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 641639811 |
|---|
| Product | conjugation TrbI family protein |
|---|
| Protein accession | YP_001766497 |
|---|
| Protein GI | 170745039 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG2948] Type IV secretory pathway, VirB10 components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGAGG CAAATACTCA ACCCGAGCTG GCGGCCCTGC CTGGCGAACG TGGAATGCCG
GGCGTGAACG ACAGTCAGCG CGGTAGCGGC ATGAAAGTCG CGTTCGTCAT CGGGGTCATC
GTGATCTTGA TGGCCCTGGT GTCGCTGGCG CTGCTGAAGT ACACGGGCAA GAAGTCCGCA
GCGACCGACA AGAAAGCCTC CATGGAGGCG CCTGCGCTGC CCGCGAGGAC GTTCACCGCA
CCCCCTGCGC CTCCCGCGCC GCCAGCGCCG CCGGAGGCCG TTCCGGTCGT GCCTGGCGTG
CAGCCGACAG CGACGGCGGC CTCGGTTCCG GGCGGCACCA GCAGCGAGGA AGCCCGCCCG
CCGGCGAAGT TGGACAAGTC GGCGTCGTCG TTGATGGTGG TCAGCGACGA TGCGGCGTCC
AGTGGCAGCG CCAACGGCGC GCAGAGCGCG GCAGGCGCCG GCGCACGACT AGGCCTGGAG
CCTGCCGGCA CCGATGGCGG CGGCCCGATG GCGAGCCTCC TGAGCGGCAC GAAGACTGAC
GCCCGCAAGG CCGGGATGAT CGGCAATCGC AATTTCATCC TGGCGAAGGG CAGTTTCATC
GACTGCGCGT TGCAAACACG GCTCGACTCC ACCGTGCCGG GGATGACCGC GTGCGTGGTC
ACCCGCAACA TCTTCAGCGA CAACGGCAAG GTGCTGCTCA TCGAGCGCGG CTCGACGGTC
ACCGGCGAGT ATCAGTCGAA CATGCGCCAA GGCATGGCGC GGATCTACGT GCTGTGGACG
CGGGTCAAGA CGCCGAATGG CGTCGTCGTC AATCTCGACT CGCCTGGCGC TGACGCGCTC
GGTGGCGCCG GACTGCCCGG TTACGTGGAT AACCACTTCT GGAAGAGGTT CGGCGGCGCC
TTGATGCTGA GCCTGGTGGA CGACACCGCG CGTTTCGCGA CGCAAGGTAG CGGCAGCAGC
AGCAGCAGCA ATCAGTTCAA TTTCAACTCT ACTGGCGAGG CCAGTAGCAA CATGGCAGCG
GAGGCGCTGA AGAACACCAT CAACATCCCC CCTACCCTCT ACAAAAACCA AGGCGAGCAA
ATCGGGATTT TCATAGCCCG CGATCTCGAC TTTTCGAGCG TTTACGATGT CCAGACCCGT
TGA
|
|---|
| Protein sequence | MSEANTQPEL AALPGERGMP GVNDSQRGSG MKVAFVIGVI VILMALVSLA LLKYTGKKSA
ATDKKASMEA PALPARTFTA PPAPPAPPAP PEAVPVVPGV QPTATAASVP GGTSSEEARP
PAKLDKSASS LMVVSDDAAS SGSANGAQSA AGAGARLGLE PAGTDGGGPM ASLLSGTKTD
ARKAGMIGNR NFILAKGSFI DCALQTRLDS TVPGMTACVV TRNIFSDNGK VLLIERGSTV
TGEYQSNMRQ GMARIYVLWT RVKTPNGVVV NLDSPGADAL GGAGLPGYVD NHFWKRFGGA
LMLSLVDDTA RFATQGSGSS SSSNQFNFNS TGEASSNMAA EALKNTINIP PTLYKNQGEQ
IGIFIARDLD FSSVYDVQTR
|
|---|
| |