| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_4866 |
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| Symbol | |
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| ID | 6119243 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | + |
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| Start bp | 5855341 |
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| End bp | 5856504 |
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| Gene Length | 1164 bp |
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| Protein Length | 387 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641636447 |
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| Product | ABC-2 type transporter |
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| Protein accession | YP_001763210 |
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| Protein GI | 170729184 |
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| COG category | [C] Energy production and conversion
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1668] ABC-type Na+ efflux pump, permease component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGATAAGCA ATATAATCAC TATGGTTAGA AAAGAGCTGA TCGATGCAGC AAGAGACAAA
CGCTCCGTCA TGGCTGGCCT CTACTACGCT ATCGGTACAC CTTTATTGAT GTGCGGCATG
TTTATGTTGC TGATTGGGCA GATGACCAGC CCAGAAGATC TAAATATCAA AATAGAGAAT
GGCAACAATG CACCAGATCT GGTTAAGTAC CTTTCTAGCC AAGGGATCAC CCATGGCGAC
AGCCTAAGCA TCAATGAAAA TGGTGACAAG TTGGATGTTA AGGATATCCG CTTAGTGATC
AGCGATGATT ACGCCGCACA GATGGCTAAA GGCTTAAGTG CAGAGATCAC CCTTATTGCA
GATAACTCCA ATGAAAAACT GCAAAACTCT ATTCGTCGCC TCGAGCGAAA CTTGCAGGCC
TACAGCAGTG AGATGGGTAG TTTACGCTTA ATTGCCCGAG GGATTGACCC AAGGGTTGTG
CAGCCGATTA AGGTCAATGT AGAAGATGAG GCGACACCTG ACTCTAAAGG CGGCGTCATA
TTAGGTGTGG CGACCATGAC CATGATCTAC GCGGTATTTA TCTCAGGGAT GAACTTAGCC
ATCGACACCA GTGCAGGAGA GCGAGAGCGT AACTCATTGG CGCTACTTCT CAGCCATCCA
GTTTCAACTC GTAATATCGT ACTGGCCAAA GTTATCGCCG TGACTGTTTT CGCCATGGTT
GGTCTACTAC TCACCCTGAT AATCTCCAAG ATATCCTATG CCTTTGTGCC ATGGCAGGAG
CTTGGCTTTA CTGTGTCAAT CAGCACAGAG TTTATCTTAC TTATGCTACT GACTGGACTG
CCTATCGCCT TGATGGCCGC TAGCCTACAG CTATTTGTTT CTTTTATGGC GAAAACCTTT
AAGGAGGCTC AGTCATACCT AACCTTAGTG CTTATTGTTC CTATGATGCT GTCGATGGCA
GCCAGCTACA ACATAGCGCC AGATACTCTG CAGTGGTTAC CAGTATCTGG TCAACAACAA
GCATTAATCG CCTTTATCAA GGGACGTGAA ATCCCAATGC TACAACTTTT ACTCTCCTCA
TTGACCACGT TTATTATCGC TATCGGATTA GCTTTCGGCA TGGAGAGATC ACTCAAAAGC
GAGAAAATTG TATTTGGTTT ATAG
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| Protein sequence | MISNIITMVR KELIDAARDK RSVMAGLYYA IGTPLLMCGM FMLLIGQMTS PEDLNIKIEN
GNNAPDLVKY LSSQGITHGD SLSINENGDK LDVKDIRLVI SDDYAAQMAK GLSAEITLIA
DNSNEKLQNS IRRLERNLQA YSSEMGSLRL IARGIDPRVV QPIKVNVEDE ATPDSKGGVI
LGVATMTMIY AVFISGMNLA IDTSAGERER NSLALLLSHP VSTRNIVLAK VIAVTVFAMV
GLLLTLIISK ISYAFVPWQE LGFTVSISTE FILLMLLTGL PIALMAASLQ LFVSFMAKTF
KEAQSYLTLV LIVPMMLSMA ASYNIAPDTL QWLPVSGQQQ ALIAFIKGRE IPMLQLLLSS
LTTFIIAIGL AFGMERSLKS EKIVFGL
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