| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_4548 |
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| Symbol | |
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| ID | 6118914 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 5513544 |
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| End bp | 5514944 |
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| Gene Length | 1401 bp |
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| Protein Length | 466 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641636119 |
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| Product | isopropylmalate isomerase large subunit |
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| Protein accession | YP_001762893 |
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| Protein GI | 170728867 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0065] 3-isopropylmalate dehydratase large subunit |
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| TIGRFAM ID | [TIGR00170] 3-isopropylmalate dehydratase, large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.182173 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0136159 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCAAAA CATTATATGA GAAGGTTTGG GACAGTCATG TTGTTGTGGC TAATGAAGGT
GAAGCGCCGC TTATCTACGT AGACAGACAT CTAGTGCATG AGGTGACATC ACCTCAGGCA
TTTAGTGGGT TAAAGGTCGC TGGACGTAGG TTACGTGCGC CAGAGAAAAC CTTTGCTACC
ATGGATCATA ATACTTCTAC CAAGAGTGCT AGCTTAGATG CATTAAGCCC AATGGCCCGT
ATTCAGGTGG AAACGCTACA GGATAACTGT AAAGAGTTCG GTATCAAACT CTATGATATT
CACCATAAAA ACCAAGGTAT TGTCCATGTG ATGGGGCCTG AGCTTGGTAT CACCTTGCCG
GGTACTGTTA TCGTGTGTGG CGATTCTCAT ACCGCAACCC ATGGTGCATT TGGAGCGCTA
GCGTTCGGGA TCGGTACCTC TGAGGTTGAG CATGTTATGG CAACTCAGAC GCTGCGTCAA
AACAAGGCGA AAACGATGAA GATTGAGGTT AAAGGCCATG TGACACCTGG CATTACCGCA
AAGGACATCG TACTAGCGAT TATCGGTAAA ATTGGTATGG ATGGTGGTAC AGGTTATGTG
GTCGAATTTT GTGGCGAGGC TATTGAAGCA CTCTCTATGG AAGGCCGTAT GACGGTATGT
AACATGGCAA TTGAGATGGG TGCTAAAGCT GGCATGATTG CACCAGATGC AACAACTGCT
GAGTATCTTA AAGGTCGTGA GTTTGCGCCT AAGGCAGAGA GTTGGGAGCA GGCGATTGAG
GCTTGGTCTG AACTGAAAAC GGATGCAGAC GCCGTTTTTG ATTCAACTGT CATACTCGAA
GCGGCTGATA TCGCACCTCA ACTTACTTGG GGAACTAACC CTGGACAGGT GGTGGCGATC
GATGGTGTTG TGCCAAATCC GCAAGATGAG CCAAATGCAA CGGTTAAGGC CAGTATCGAG
AAAGCCTTAG AGTATGTTGC TTTGAGCGCG GGTACTAGCA TGAAAGATGT CAGTATCAAT
AAGGTCTTTA TTGGATCTTG CACAAACTCG CGTATTGAAG ATCTACGTGA TGCGGCTTTG
CATGCTAAAG GTAAGCATGT GGCTGAAGGT GTAACTGCGA TTGTAGTACC AGGCTCAGGT
TTAGTTAAAG AGCAAGCAGA GGCTGAAGGT TTAGATAAGA TCTTTATCGA AGCGGGATTT
GAGTGGCGTC TACCGGGCTG CTCTATGTGC TTAGCGATGA ATGATGATCG ATTGGAGGCT
GGCGATCGCT GTGCTTCTAC GAGTAATCGT AATTTCGAAG GGCGTCAGGG ACGGGGGAGT
CGAACTCACC TTGTTAGTCC TGCCATGGCA GCTGCGGCCG CAGTTGCGGG TCATTTTGTC
GATATTCGTC AAACGCTTTA G
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| Protein sequence | MAKTLYEKVW DSHVVVANEG EAPLIYVDRH LVHEVTSPQA FSGLKVAGRR LRAPEKTFAT
MDHNTSTKSA SLDALSPMAR IQVETLQDNC KEFGIKLYDI HHKNQGIVHV MGPELGITLP
GTVIVCGDSH TATHGAFGAL AFGIGTSEVE HVMATQTLRQ NKAKTMKIEV KGHVTPGITA
KDIVLAIIGK IGMDGGTGYV VEFCGEAIEA LSMEGRMTVC NMAIEMGAKA GMIAPDATTA
EYLKGREFAP KAESWEQAIE AWSELKTDAD AVFDSTVILE AADIAPQLTW GTNPGQVVAI
DGVVPNPQDE PNATVKASIE KALEYVALSA GTSMKDVSIN KVFIGSCTNS RIEDLRDAAL
HAKGKHVAEG VTAIVVPGSG LVKEQAEAEG LDKIFIEAGF EWRLPGCSMC LAMNDDRLEA
GDRCASTSNR NFEGRQGRGS RTHLVSPAMA AAAAVAGHFV DIRQTL
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