Gene Swoo_4516 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_4516 
Symbol 
ID6118872 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp5461559 
End bp5462440 
Gene Length882 bp 
Protein Length293 aa 
Translation table11 
GC content43% 
IMG OID641636078 
Productradical SAM domain-containing protein 
Protein accessionYP_001762862 
Protein GI170728836 
COG category[C] Energy production and conversion 
COG ID[COG1032] Fe-S oxidoreductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.193684 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCGCTATA TTGAACCTGT ATTTCGTCCA CCATCTGAGT GGAAATCCCT GATCTTACAA 
GTGACTAATG GTTGCAGTTG GAATAAGTGC ACCTTTTGCG ACATGTACAC GGCACCTCAA
AAACGATTTC GAGCTCAAAA ATTAGATAAG ATTTTAGAGG ATATAAAAGT AGTAGCTAAT
ACAGGTCAAA ATATCACTCG GGTATTTCTT GCTGATGGTG ATGCAATGAG TCTCCCTTTT
GAGCGTTTAG AGGCTATTTG CTTACTTATT CAGGAACATC TACCTAGTGT GACACGAATA
AGCAGCTACT GTTTGCCAAG AAACCTTAAG AATAAGACGT CTGAGCAGCT GACTAGATTA
CGAGAGCTGG GTTTATCTTT ACTCTATATT GGCTGTGAAA GTGGTGATGA TGAGGTGCTT
AATCGGATAG AGAAAGGGGA GACCTATGCC TCGTCTTTAA CGGCACTGTT AAAGATAAAA
GCGGCAGGCA TTAAGTCCTC GGTAATGATC TTAAATGGCT TAGGTGGCAG TGGCCTTTCC
GAGCAGCATG CGATTAACTC GGCCCGTTTG ATGAATGCGG CGCAGCCTGA GTATCTGTCG
ACTTTGGTGG TTACCTTGCC TTTAGGTACT GAGCGAATGG ATTCGGCTTT TGATGGTCAC
TTCTCTCTAC CCAATCAAGC TGAGTTGTTT AAAGAGATGC ATACTTTACT AGGTCACCTT
GAGCTGGAAA GAACAATATT TCGCTCGGAT CATGCATCTA ACTATTTAGT GCTTAAGGGT
ACACTAGGTA AAGATAAGCC TAGGCTGTTG GCTGAGGTAA AACAAGCGAT TAGCAATCCA
TTGCAAACAA GCCTGAGAAA GGAGTGGCAA AGAGGGCTAT GA
 
Protein sequence
MRYIEPVFRP PSEWKSLILQ VTNGCSWNKC TFCDMYTAPQ KRFRAQKLDK ILEDIKVVAN 
TGQNITRVFL ADGDAMSLPF ERLEAICLLI QEHLPSVTRI SSYCLPRNLK NKTSEQLTRL
RELGLSLLYI GCESGDDEVL NRIEKGETYA SSLTALLKIK AAGIKSSVMI LNGLGGSGLS
EQHAINSARL MNAAQPEYLS TLVVTLPLGT ERMDSAFDGH FSLPNQAELF KEMHTLLGHL
ELERTIFRSD HASNYLVLKG TLGKDKPRLL AEVKQAISNP LQTSLRKEWQ RGL