Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Swoo_4279 |
Symbol | |
ID | 6118634 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella woodyi ATCC 51908 |
Kingdom | Bacteria |
Replicon accession | NC_010506 |
Strand | + |
Start bp | 5183141 |
End bp | 5184529 |
Gene Length | 1389 bp |
Protein Length | 462 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 641635845 |
Product | aminotransferase class V |
Protein accession | YP_001762630 |
Protein GI | 170728604 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0520] Selenocysteine lyase |
TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAATAACG ATAATAAAGA TGTCGCATCA GGTTTAAACC GCCGTAGTTT TTTAAAAACA TCTACAGGCT TAGTACTGGC AGGGGCTGGT ACTATGATGT TTCCATCGGT CGCAGCAGCT AAAGCAGATG AGCTAGGACC TACCCAGTTT AGAGGTCATA ATTCAGACCA TAAACTGTGG AAAAAAGTGC GTAAAGAGTT TGTGCTAAAC AAGCGCACAA CTTACATGAA CGTAGGTACA TCAGGCTCTA TGCCAAAGAG CATTTTAAAA TCTTATGCTA AAACTAATGA GATGATCTCT GCCAATCCTT GGCAGAGCAA CATTCCAACC ATTGAGCTAG CTAGGCAGGT CGCGCCTGGT TTCGGGGCCG ATGAGCATGA ACTAGTTTTG AGCCGCAACA CGACTGATGG CATGAACTCA ATCATCAATG GCCTCCAGTT TGAAGAGGGG GATGTCGTTT TAACCACTCA CCACGAGCAT CCAGGTGCAA CCATTCCACT TAAACATGTA AGTGAGCGCT ACAATGTTGA AGTGGTTGAG GTTGAGATCC CTGTATATAC AGGCGAAAAC CAAGTATCTG AAGATGACTT TGTTAATGCA TTTGCCGATG CAGTCGCAGA GTACGGTAGC CGCGTTCGTC TGATCGTTTT CTCTCATGTA ACTTATACAA CAGGAACCAG TTTACCTGCT AAGCGCATCT GTAAAGAAGT GGCGATCCCT AATCGTATTC CTACTTTAAT CGACGGTGCC CACACCCCTG GCATGCTAAA CCTGAACTTC CATGATATCG ACTGTGACTT TTACTCAGGT GCGGGTCACA AATGGCAGTG TGGCCCAGGT GCAACTGGCA TCTTATATAT TCGCGATAAC GCGCAACGCT TAGCTGAGTT TTGGAACGAT CGTCCAACAC CGCTTTGGTG CATCAACTCA TCTTCGTCCT CTACCGCTAT ACAGGCTAGA TTCCAGTCTA TCGGCCAAGA TAACTACCCA GCAAAGCAAG CCTTAGCTGA CGCTTGTGCT ATGTGGGAGG AGATTGGCAG AGATGTAATT GAGGAGCGAG TGCTGGATCT AAGTGAGCTT TGTAAACAGG AGTTGTTTGA TACCTTCCCC TATGCAAACT TCTATGCGCC GAACATCCGT GAGCTATCAA GTGGCCTAAC AACGTTTAAC CCATTCTACG ATCAACATGA TGGCGAACTG TTAACCCAAT TCCGCGATCG TCTGCATGAG GAGTATGGTT ACATAGTCCG TACCACCTCT TTCTATAACA AGAAAGATGA TATGCAAAAA ATCCAAACCA TCCGCATCTC GACTCACCTT TTCCACGATG AAGATGATGT AATTGGGTTA GTTAAAGCGA TGAAACGTCT TTATCGCAAC ATGGCTTAA
|
Protein sequence | MNNDNKDVAS GLNRRSFLKT STGLVLAGAG TMMFPSVAAA KADELGPTQF RGHNSDHKLW KKVRKEFVLN KRTTYMNVGT SGSMPKSILK SYAKTNEMIS ANPWQSNIPT IELARQVAPG FGADEHELVL SRNTTDGMNS IINGLQFEEG DVVLTTHHEH PGATIPLKHV SERYNVEVVE VEIPVYTGEN QVSEDDFVNA FADAVAEYGS RVRLIVFSHV TYTTGTSLPA KRICKEVAIP NRIPTLIDGA HTPGMLNLNF HDIDCDFYSG AGHKWQCGPG ATGILYIRDN AQRLAEFWND RPTPLWCINS SSSSTAIQAR FQSIGQDNYP AKQALADACA MWEEIGRDVI EERVLDLSEL CKQELFDTFP YANFYAPNIR ELSSGLTTFN PFYDQHDGEL LTQFRDRLHE EYGYIVRTTS FYNKKDDMQK IQTIRISTHL FHDEDDVIGL VKAMKRLYRN MA
|
| |