Gene Swoo_4017 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_4017 
Symbol 
ID6118367 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp4888276 
End bp4888803 
Gene Length528 bp 
Protein Length175 aa 
Translation table11 
GC content38% 
IMG OID641635578 
Producthypothetical protein 
Protein accessionYP_001762368 
Protein GI170728342 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGAATC CATCCATAAA AATGAACGCC CAGTTAAATG ATATTCTCCA GGATGAGAAT 
TTTGACAATT TCCATGTGAC ACAACTACGG GATGCATATT TAGCAAGCTC TTCAGTGGCT
CAAGATTTCA TCGAGGCTCG TAAGTATGTG TATAGACAAA TTCTTAGGCT TGTTAAGAAA
GGGGGGTTAC TAAAAAATGG AACTAAAAAC TCCAAAGGTG TTACGTACCA GAAGTCTGAG
TTATTTTTTA AAGCAAACTT TATAATTCAA AGTAAGTCGA AGCCTCTAGG CCTAATGACT
ACTCATACCA GTTTTGGAGT CCAGCGACTT GAAGAGCGTC TTAAAGAAAC TGAAATCGAC
CTTCTTACAA GCATTGGCGA GTCAGAAGAA TATATGCGTC TATATGAATC TTTCCCTGAA
ATGAAGATTC ACCTTGAATC CATGTATTTA CAAGCGCGTG AAAATAGCTC GAAACTACTT
GGGCAAATCA AAGCGATTAA ATCTGTTCTC GCCTATCAAC TAAAGTAA
 
Protein sequence
MSNPSIKMNA QLNDILQDEN FDNFHVTQLR DAYLASSSVA QDFIEARKYV YRQILRLVKK 
GGLLKNGTKN SKGVTYQKSE LFFKANFIIQ SKSKPLGLMT THTSFGVQRL EERLKETEID
LLTSIGESEE YMRLYESFPE MKIHLESMYL QARENSSKLL GQIKAIKSVL AYQLK