| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_2942 |
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| Symbol | |
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| ID | 6117257 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 3602734 |
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| End bp | 3603813 |
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| Gene Length | 1080 bp |
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| Protein Length | 359 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641634486 |
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| Product | AraC family transcriptional regulator |
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| Protein accession | YP_001761310 |
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| Protein GI | 170727284 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00260427 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAACTCG GTGATATCTC TGTCTCGTAC ATTGAAATTG TGATTAAAGC TATGTTGCAT
TTGGGCATCA ATCCTGATGA TATTTTAGAT AAATACTCCA TTGATCATAA AGGCTTATCA
TCACCCGATG CGAGAGTGAC CATCCCTAAA TTTATGCGTT TAGGCCATGA CTGTATTGAA
AAGTCACAAG CACCTTGGCT AGGACTCGTG ATGGGAGAGG TGACGACGGC AACTAACTTA
GGGGTGGCAG GCTTGTTGGC ACTCTCATCA CAAGATCTCA AGCAAGCGTG TGAACAGCTT
GCGACCTATG AGCTGCTTAA TAAGTATAAC TCTCGAGGCC AGTCGGCCTT TTATGTTAAT
CATGCCTTTG GAATGGAGAT GGGGAAAAGC CGTGAGCTGT GCCGTGAATA TGGTATTGAA
GATGGTCAGG GCGTACTGAT GTTCTACTCA ATCAACCCCT ATAACGAGTT TAATCATTTT
GTGGTGGACT CAGTATTATC AGGTTGGTAT CAAGTGATTA AAAACCTTAC TGGCCATGAA
GGTGCGATCG AGAAGGTCTG TTTCGAATTT CCAGCTCCAG AGTATGCGGA TAAATATAGT
GAGTATTTCA ATTGTAACGT CGCCTTTAAT CAATCAAACA ACTATTTGGT GATTAAGGCA
CAAGCGTTAG ATTGGGCTTG TCTAAATCGC AGTGCACCGA CCTTTGAGCT ACTAAGGCGA
AGCGCAGATG CTGAGCTTGA GAAGGTGCGT TTAGGCTTAA GCTTTCATGA GAAAGTCAGC
CGTGTAATAG GTCCGCTTCT TGATGGAACG ACACCGACTT TAGAGCAGGT CTCTGAGCAG
CTAAATATGG CCCCTTGGAC CGTTAGGCGC AAGCTGGTGG AGGAGGGGGG AAGCTTTCAG
CAGACGCTCA ATGAGACAAG GCGAACTCTC TCTATCAGCT ATGTTCGTGA TACAGCCCTG
ACCCTTGGAG AGATAGCCTA TCTGCTGGGC TTTGGCTCAC CCACCGCCTT TCAACGTGCC
TTTAAACGTT GGACGGGAGA AGCGCCAGGG CGCTTCAGAA CCTCTAAAAG TAAACAGTAG
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| Protein sequence | MKLGDISVSY IEIVIKAMLH LGINPDDILD KYSIDHKGLS SPDARVTIPK FMRLGHDCIE
KSQAPWLGLV MGEVTTATNL GVAGLLALSS QDLKQACEQL ATYELLNKYN SRGQSAFYVN
HAFGMEMGKS RELCREYGIE DGQGVLMFYS INPYNEFNHF VVDSVLSGWY QVIKNLTGHE
GAIEKVCFEF PAPEYADKYS EYFNCNVAFN QSNNYLVIKA QALDWACLNR SAPTFELLRR
SADAELEKVR LGLSFHEKVS RVIGPLLDGT TPTLEQVSEQ LNMAPWTVRR KLVEEGGSFQ
QTLNETRRTL SISYVRDTAL TLGEIAYLLG FGSPTAFQRA FKRWTGEAPG RFRTSKSKQ
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