Gene Swoo_2421 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_2421 
Symbol 
ID6116695 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp2967434 
End bp2967913 
Gene Length480 bp 
Protein Length159 aa 
Translation table11 
GC content43% 
IMG OID641633929 
Producthypothetical protein 
Protein accessionYP_001760794 
Protein GI170726768 
COG category[S] Function unknown 
COG ID[COG3198] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000019522 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000597978 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAACAAC CTCAAGCCTG GTATAAGCAG TTCTGGCCTT GGTTCCTAAT TATCTTGCCG 
CTATGTGCTG TGGTGGCGAG TATCAACCTA CTCTTCATCG CCATTGATAA TAAAGATGCG
CTCGTTTCAG AAGATTATTA TAAAGATGGT AAGCGTATTA ATATGGATCT GAAGAAGATC
AAGTATGCCA AGCAACTTGG TATGCAGTTT GAACTTCAGG TTGACGATAA TGAGCTAACT
ATTATTCAAC ACGGTGGTGA GGAGTATTTA GCTGCACTGA AAGTTGAGTT CTACCACCCA
ACAATAGAGA GTCGTGACTT TAAGCTGGTT GTAACGGCCA GTGGCGATAA GGCGTACCGT
GTCTCTTTGG ATAAGCCTAT TACAGGTGCT TGGGAGGTTA GATTAGAAGG GTACGATCAA
AGCTGGCGCA TTCAAAAGCG TCTGCAAATT GCCGATGACA CTGAGTATTG GTTAAACTAA
 
Protein sequence
MKQPQAWYKQ FWPWFLIILP LCAVVASINL LFIAIDNKDA LVSEDYYKDG KRINMDLKKI 
KYAKQLGMQF ELQVDDNELT IIQHGGEEYL AALKVEFYHP TIESRDFKLV VTASGDKAYR
VSLDKPITGA WEVRLEGYDQ SWRIQKRLQI ADDTEYWLN