| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_1720 |
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| Symbol | |
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| ID | 6115961 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 2136360 |
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| End bp | 2137229 |
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| Gene Length | 870 bp |
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| Protein Length | 289 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641633202 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001760100 |
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| Protein GI | 170726074 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.178865 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0235109 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATATAA GGCAGCTTAA ACATCTAGAT TCACTGGTAA AACATGGCAG CTTCACTAAA
GCTGCCGAAA GCCTGAACAT GGCACAACCT GCGTTAAGCC AGAGTATTAA ACGACTCGAA
CTTTCACTTG GGGTTACCTT AGTCACCCGC AGCATAAAGA AAGTATCACT AACGGCAGAG
GGAAAGGCTC TACATAGCCA CGCCTTACTT ATCATTAAAC AGCTTAAGCA GGCTGAGTCT
CATATTAAAT CAATGGCTAA CCTAACCAAA GGTGAAGTTA ACATAGCCGT GCCGGGCATG
CTTGGCTCCT TCTACCTGCC AAGCAGGCTA ATGGCTTTTA GACATCAATA TCCGGATCTT
AAACTGTCGC TTTTTGAAGG AGGAACACGA GACTCCTTGA GGATGTTGAT ACAGGAGGAG
GTCGATGTTG CCATCATCAC AGCACAAGAT CTTAAGCCCG AATTTGAAAG CCAACTGCTG
TTAACTGAGC AGATGGTGGT GGCACTTGGC ACGGAGCACC CTTTGGCCGA GCAGGAAGAT
ATCAATATTG AGCAGTTTTT TGAGCATGAA CTTGTGATGT TTAAACCGGG TTACTTCCAT
CGGGAGTGGA TGTTATCTCA GGCAGACGCA TTAGGCCTGC ATGCCAACAT CGGCTTTGAA
ACCAATCTAA TCAACTTGAT CAAACAGATA GTGTCACAGG GCTTTGCTAT CACCAGTGTA
CTCGAGATGG TGATCAGTGA AAAAGATGAA ATCTTAGCTA AGCCGTTCAC TCCACCAGTT
TTTCTCGATC TTCATATCGC TTGGAAAAGA CACAAACCTA TCAGTGTTGC CGATAGAGCC
TTTGTCGACT TCTTGATGAA AAATAGGTGA
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| Protein sequence | MDIRQLKHLD SLVKHGSFTK AAESLNMAQP ALSQSIKRLE LSLGVTLVTR SIKKVSLTAE
GKALHSHALL IIKQLKQAES HIKSMANLTK GEVNIAVPGM LGSFYLPSRL MAFRHQYPDL
KLSLFEGGTR DSLRMLIQEE VDVAIITAQD LKPEFESQLL LTEQMVVALG TEHPLAEQED
INIEQFFEHE LVMFKPGYFH REWMLSQADA LGLHANIGFE TNLINLIKQI VSQGFAITSV
LEMVISEKDE ILAKPFTPPV FLDLHIAWKR HKPISVADRA FVDFLMKNR
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