Gene Swoo_0663 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_0663 
Symbol 
ID6114897 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp916600 
End bp917379 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content47% 
IMG OID641632149 
ProductSel1 domain-containing protein 
Protein accessionYP_001759054 
Protein GI170725028 
COG category[R] General function prediction only 
COG ID[COG0790] FOG: TPR repeat, SEL1 subfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value5.38554e-08 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000142702 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGAAATTTC ATCCGTTAAT CATAGGTGCT GGATTTGTCA TTACCTCGGT AATGAGCACT 
GCTGCGCATG CTTTTTCAAT TCCACAACCC GCTACTGCTG AAGCTGCAAG TAAACTGGCT
CATATTGAGC TTAAAGCAAC GCAGGGTGAA CAAGAAGCGC AGTTTCTGTT GGGCTTGATG
TACCTCTCAG GGCGTTTTGT CGCACAAGAT CAGCCCTTGG GAATAAAGTG GGTTACTTTG
GCTGCTGAGC AGGGGCACGT AAAGGCGCAG CAAACCATTG CAGACCTCTC CTTTGAGGGC
AATATTATTG CTCGAGATCT GGCGGTTGCC GAGCGCTGGT ATCTCAGTCT CAGTGAGCAG
GGCAGTAAAT GGGCCGAATT CCGACTCGGA TTTATCTATG CTGCCGGTGG TGAAGGTGTT
CAACGTAACT GTGGTAAAGC GGTTAAACAC TTTAGTGCAG TTGGTGATGA GGTCTCGCTT
GGTAACGTGG CTTGGATTTT ATCTACCTGT CCAGAAGCTA AATATCGAAA CGGCGATAGG
GCATTGGAGC TTGCTCAAAG TCTAGTGAAA GCCAATCAAG AAGATCCGAC CAATTTAGAT
AATCTCGCCG CGGCTTACGC TGAGATAGGT GACTTTAGTT CGGCAATTGT AACCCAACAG
AAAGCGATTC ATGCCTTAAA GTTAAGTGAG CAAGTTGATC GCTCTGATGA GTTTGAGCTG
CGCTTGCAAA CTTATGAGCA GAACAAACCA TTTCGTGAAA AAGTACCACT CAGTGATTAG
 
Protein sequence
MKFHPLIIGA GFVITSVMST AAHAFSIPQP ATAEAASKLA HIELKATQGE QEAQFLLGLM 
YLSGRFVAQD QPLGIKWVTL AAEQGHVKAQ QTIADLSFEG NIIARDLAVA ERWYLSLSEQ
GSKWAEFRLG FIYAAGGEGV QRNCGKAVKH FSAVGDEVSL GNVAWILSTC PEAKYRNGDR
ALELAQSLVK ANQEDPTNLD NLAAAYAEIG DFSSAIVTQQ KAIHALKLSE QVDRSDEFEL
RLQTYEQNKP FREKVPLSD