| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Swoo_0206 |
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| Symbol | |
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| ID | 6114429 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella woodyi ATCC 51908 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010506 |
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| Strand | - |
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| Start bp | 255101 |
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| End bp | 256615 |
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| Gene Length | 1515 bp |
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| Protein Length | 504 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 641631687 |
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| Product | O-succinylbenzoate-CoA ligase |
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| Protein accession | YP_001758602 |
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| Protein GI | 170724576 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | [TIGR01923] O-succinylbenzoate-CoA ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00226035 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.00000242009 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | TTGGCTACAG ACAAGTTTCA ATTACGCGCC CTCTCTCCAC TGCATCAAGC AGCTGTGGAC
TATCCAGAGC GTGATGCACT CGTATGGCAT CAAGATGGGG TGAAGCATCA GCTAAGCTAC
AGCGCACTAA GTCAAAAAGT GGTCGCTATT GGTGAGCAGT TAACTGCTCA AGGTCTCTTA
CCTGGTGATC GTTTAGCTTG TATCGATGTT AATTCGGTAG AGTTAATCCT GCTCTACTGG
GCTTGCATCG ACACGGGTGT CATTTTTTGT CCGCTGTCGC CACGATTTCC TATTAAGCAA
CTTTCTAAGC TGATTAAGCA ACATAGGCTC AACTATATCT GGAGCGGAGC GCACTACAGT
CCGCTCTTTT CATCTCATCA AGCTAAGCCA CAAGTACCTG AACTGCTGTT CTCGGACAAC
GGTCTCTCCA CTGCTAAGTT AACCGTAGAC TTCAATAGCA GCAGTAGAGC AAAGGCAGTA
GAGGTGAGTA TTGAGTCTCC TGCTAATCTC ATCTTAACAT CCGGCAGCAG CGGTCAGCCC
AAGGCGGCGG TGCACAGCCT TAGTAACCAT ATCGTCAGCG CCACAGGCTC TGCAGATCAG
ATCCCCCTCG AGGTTGGAGA TGCTTGGTTG CTCTCATTGC CGCTATTTCA TATCGGCGGC
TTGGCCATCA TTAACCGCTG CGCATTAGCT GGGGCCGCTG TGGTGATGCA AGATAAAACC
CTCAGCCTTA CCGCTCAACT AAAACAAACG CCTATTACTC ACCTGTCGCT GGTTTCGACA
CAGCTAGTTC ACTTGTTAGA GAGCCAGAGC ACTACCAAGG AAAGCTCGCC TCTACAGGGA
GTCAAGTCAC TGCTACTAGG AGGTGGAGCT ATCTCCTTAG ATCTTATTGA AAGACTTAAT
ACCCTGAATA TTAATAGTTT TACCAGCTAT GGCATGACAG AGATGTCTTC GCAGATCACC
ACAGGTACGG CAAGCGCAGA TGGCAGTTGT GGGCAGACAA TCACTGGCAG AGAGCTCAAG
ATTGTCGATG AACAGATCTA TGTCAGAGGC GGCACACTGT TTTTAGGTTA TCTCGAGTGG
AGCGACAACC AAGCTAAGTT CAATCTGCCA CTAGAGGACG GCTGGTTCCC CACCAAAGAT
AGAGGTTACT GGGATAAACA GGGTAAGCTG CATATCTTAG GGCGTTGCGA CAACATGTTT
GTCTGTGGCG GCGAGAACGT GCAACCAGAA GAGATAGAGG CAGCACTGAA ACTTCATCCC
CAGATAGACG ACGCGATAGT ATTTCCTCAA ACTGATAGCG AGTTTGGCCA CTTACCTACG
GCAGTGATTA AACCTTCCCT CCTCTGCACT GAGGGGATAG AGCAACTCAC CGCAAGTGAT
GAGTTTGAGC AGTTTTTATG TGACAAGATA GCCCGCTTTA AACGTCCACG CCTCTACTAC
CCTTGGCCGG AGGTAGAGTC GGTTGGATTA AAAGTATCAA GAAAGCTAGT GATAGAGGCG
GTGTTGAAGG GTTAA
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| Protein sequence | MATDKFQLRA LSPLHQAAVD YPERDALVWH QDGVKHQLSY SALSQKVVAI GEQLTAQGLL
PGDRLACIDV NSVELILLYW ACIDTGVIFC PLSPRFPIKQ LSKLIKQHRL NYIWSGAHYS
PLFSSHQAKP QVPELLFSDN GLSTAKLTVD FNSSSRAKAV EVSIESPANL ILTSGSSGQP
KAAVHSLSNH IVSATGSADQ IPLEVGDAWL LSLPLFHIGG LAIINRCALA GAAVVMQDKT
LSLTAQLKQT PITHLSLVST QLVHLLESQS TTKESSPLQG VKSLLLGGGA ISLDLIERLN
TLNINSFTSY GMTEMSSQIT TGTASADGSC GQTITGRELK IVDEQIYVRG GTLFLGYLEW
SDNQAKFNLP LEDGWFPTKD RGYWDKQGKL HILGRCDNMF VCGGENVQPE EIEAALKLHP
QIDDAIVFPQ TDSEFGHLPT AVIKPSLLCT EGIEQLTASD EFEQFLCDKI ARFKRPRLYY
PWPEVESVGL KVSRKLVIEA VLKG
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