Gene Swoo_0081 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSwoo_0081 
Symbol 
ID6114303 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella woodyi ATCC 51908 
KingdomBacteria 
Replicon accessionNC_010506 
Strand
Start bp99563 
End bp100954 
Gene Length1392 bp 
Protein Length463 aa 
Translation table11 
GC content35% 
IMG OID641631561 
Producthypothetical protein 
Protein accessionYP_001758477 
Protein GI170724451 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTAGCAA TTGATATGAA TATATTAATA GCTGGAGTTG TACTTTGCTT TATTGGTATC 
TCGGCATTAT TTTTTACTCT AAAGAAGCGT AAATCAATTC TCCTTACAGC AACTAAAGAA
GCTGAAACAC TTCTTTCCCA AAGCCAAGCT AAAGCAAGTA ATATCGTTAA TTCTGCTGAG
AAAACGAAGA AAAACCTGTT AGATGAAGCT GAAAATAGAA AAAGATTCTT GTTAGAAGAA
GCTGAGCAAG GAGTTATTCC TTTCCATGAA AGAGTTGAAC GCTTAAAGCT TGCAGATAAA
GAAATAACTT CTCGCCTTAA GCAATCAAGA TCCATCATTG ATGATATTAC AGATAAAAGC
TGTTCTCATG CCGCAGACAT AGAATTATTA ACAGAAGAAG ATCTCCTTTC AAGTCAATCT
TATCAAGATG ATAGAAAAGA TGTGAAGGCT AGATTAAAGA AATTAGCTGT GAATGCGATC
GATGGTGTTA GAGGAAGCGG TTCAAATGTA AATATCGGGA AGTTTGTTTC TATTTCTGCT
AAAGCAGACA TGGCTGGAGC ATTGCTATTA ACTACAGTAG AGATGCTTTG CACTAAGACT
AATGCAAACA ATGGACACCA AGCCTTAGAA AAGTTATCGG AGTCTATTAT TGCAACAGAA
GCTTTGATTA AATGTATTGA TAGCAGAGCT ACAATCAATC AAGAATTTAA AGCTTTACTC
ATCAAAAGGC TAGAAATAGA GATTCATTTT AAAAAAGCAA AACAGCTGGC CAAGGAAGAG
CAGAGAGAAT TAAGGGAGCA AGAGAAAGAA GAGAGAAATG CAAGGCAAGA AGCAGAGCGA
ATTCAGAAAG AAGCAGAAAA AGAAGAGAGA ATAAAAAGCG ATGCAATTGC AGAACTTGAA
AAGAAAATGG CTGAAAAATC TGATGCAGAA AAAGCAATTT ATCAAGAAGA GTTAAATCGA
TTAAAACTAG AGCTTGAAGA AGCCCATCAA AAATTTGAAA GGGCTAAAAG TCGCGCGCAA
GAAACTAAAC AGGGTCACGT ATACGTTATA TCAAATATTG GCAGTTTTGG AGAAGATATA
CTTAAAATTG GTATGACTAG AAGAATGGAC CCTATGGACA GAGTTAAAGA GCTTAGTGAT
GCAAGTGTTC CTTTTACATT CGATGTTCAT GCTTTAATTG AGTCTGATGA CGCACCTAAT
TTAGAATCTA CTTTGCACAA GGTTTTCGAT GATAAACGTG TGAATAAGGT CAATCGCAGA
AAAGAATACT TCAATGTGAA CCTTAGTGAA ATTGAGCAAG AGCTCCAAAG GTTAGATATT
AATGCGCTAA TAAATAAAGT AGCTAGTGCT GATGAATATT ACCAGTCTAT AAGACTTGAA
AAGTGCTTGT AA
 
Protein sequence
MVAIDMNILI AGVVLCFIGI SALFFTLKKR KSILLTATKE AETLLSQSQA KASNIVNSAE 
KTKKNLLDEA ENRKRFLLEE AEQGVIPFHE RVERLKLADK EITSRLKQSR SIIDDITDKS
CSHAADIELL TEEDLLSSQS YQDDRKDVKA RLKKLAVNAI DGVRGSGSNV NIGKFVSISA
KADMAGALLL TTVEMLCTKT NANNGHQALE KLSESIIATE ALIKCIDSRA TINQEFKALL
IKRLEIEIHF KKAKQLAKEE QRELREQEKE ERNARQEAER IQKEAEKEER IKSDAIAELE
KKMAEKSDAE KAIYQEELNR LKLELEEAHQ KFERAKSRAQ ETKQGHVYVI SNIGSFGEDI
LKIGMTRRMD PMDRVKELSD ASVPFTFDVH ALIESDDAPN LESTLHKVFD DKRVNKVNRR
KEYFNVNLSE IEQELQRLDI NALINKVASA DEYYQSIRLE KCL