| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mrad2831_6494 |
|---|
| Symbol | |
|---|
| ID | 6135978 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium radiotolerans JCM 2831 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010502 |
|---|
| Strand | + |
|---|
| Start bp | 21800 |
|---|
| End bp | 23965 |
|---|
| Gene Length | 2166 bp |
|---|
| Protein Length | 721 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 641625057 |
|---|
| Product | type I secretion system ATPase |
|---|
| Protein accession | YP_001752077 |
|---|
| Protein GI | 170745630 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG2274] ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain |
|---|
| TIGRFAM ID | [TIGR01846] type I secretion system ABC transporter, HlyB family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTGAAGC CTGCTCTCAT TCCTGATCAA GCCGAGCCGG TCGATACGGG CATCCGGGCG
CTGTGTGCGA TTGCAGGCTA TTATCGCATC GCGACTGAAC CGGATCATAT CCGGCGCGAG
TTGGCCCTGG ATCGAACCAA CGCGGACGTC AGCAGCCTAC TGCGAGGTGC GAAGCTTTCT
GGGCTCAAGG CGCGTGTCGT GCGCATTAGA AACCGGAAAC GGCTGAGCCG CCTTCCTGTG
CCTGCGATCA TTCGCCTCAA AGACCATAGT TTTTCCGTTT ACAGTGGTGT ATCGCCGGCC
GGAAATTTTC GATTGGTGGA TCCGGTCAGC CGGATTGCGC AAGATCTTCC CTATGAGCAA
TTTACTGACA CGGTCACGGA CGAGATAATA CTTGTTCAAC GTCAATTCCG AGGCTCCGGA
ATTGATCCAA CTACATTTGG GTTCCGTTGG TTTTTACCGT CCATCTGGCG GTACCGCTCG
CCGATCGCGC ATGTTCTCAT CGCATCGCTA TTCGTTCAGA TCTTCGCGCT CGTCACACCA
TTGTTTTTTC AAGTCATTGT GGACAAAGTC CTTGTTCACA AAGGCTATTC CACTCTGCTA
GTGATCGTTG CTGGACTTGC CGTGATCGGC CTATTCGATG TCGTGTTGCA GTTTCTACGC
ACATACGCTC TTTCGCACAC GACCAATCGC ATCGATGTTG AACTAGGTCA GCGATTATTT
CGCCATTTGC TCAACTTGCC ACTTGGTTAT TTTGAGACGA GATCCGCCGG ACAGACCGTT
GCTCGTATGC GGGAACTTGA AACGATCCGT GCCTTTCTTA CAGGGCAGGG GTTATTTTCG
GCTATAGATC TCATTTTTAC GATCATCTTT ATCGCGGTCT TGCTCGCCTA TTCGGTCAAT
CTCACAGTTA TAGTGCTTAT TTCAATACCG ATATACCTTG TAATCAGCGC ACTTTTCCGA
CCTGCGCTTC GAGATACAAT CAAGGCTAAA TTCGACAGGG GTGCCGAGAG CCAGCAATTC
CTCGTCGAGG CGGTAGTCGG CATCCAGACG CTAAAGGCTT CTGCCGTCGA GCCGATGATG
CGGGCACAGT GGGAGGAGCG ATTAGCGGCG TACGTTCGCA CTAGTTTCAG CGCGACCCTA
CTTGCGGCCG GAGGTCAGAA CGCGATCCAG TATGTCAGCA AGCTTACCTC TGCGGCGCTG
ATGCTGTTCG GTGCCAAGGC CGTTATCGAC GGCGACCTGA CTGTTGGAGA ACTCGTCGCC
TTCAACATGA TTGCTGGGCA GGTCGCTCAA CCTATCCTGC GGCTCTCCCA AATCTGGCAG
GACTATCAGC AGGTCCAGAT TTCGGTCGAT CGCCTCGGTG ATATCCTCAA TGCTCCTCCG
GAACAGACCT CGAAGGCGAG CGCCGGACTG CCGCCGCCGA AAGGTGCGAT CGAGCTGCGC
AACGTTTCCT TCGCGTATCG TCCAGGTGCC CACGATGTCC TTCAAGACGT CTCCCTCGCT
ATCCGACCGG GCGAGGTGGT CGGGATTGTC GGATCATCTG GATCGGGTAA GTCGACACTG
ACGAAGCTCG TACAAAGGCT CTACACACCA CGAGAAGGTC AGATCCTGGT AGACGGGATC
GACATCGCAC AGACCGATCC AGCTTGGCTA CGCAGCAACG TCGGTGTCGT CCTGCAGGAG
AACCTGCTGT TCAACCGCAC GATCCATGAC AACATTGCGT TCGCCAATCC GGCCATGCCT
CGTGCAGCCG TGATGAACGT CGCTCGTTTG GCTGGCGCCG ATGAGTTCAT CAACCGCTTG
CCGATGGGAT ACGACACTCA GATCGAGGAG CGGGGTGCCA ATTTGTCAGG CGGCCAGCGT
CAGCGGATCG CTATTGCCCG AGCGCTGGCA ACGAACCCCA GGATCTTGAT CTTCGACGAA
GCGACGAGTG CACTTGATTA TGAGAGCGAG CGAGTCATCC AGACTAATAT GCGACAGATA
GTGAGAGGCC GCACGGTGAT CATCATCGCT CACCGCCTCG CGACAGTGCG TCCCTGCAAT
CGCATCGTTG GCATGGCTGA GGGACGGATC GTAGAGGTCG GGTCGCATGA AGATCTGCTG
CGCCGGCAAG GCGGCCTCTA CGCCCGACTT TGGGCCCTGC AGACCGATCA GGCGATGGCA
TCGTGA
|
|---|
| Protein sequence | MLKPALIPDQ AEPVDTGIRA LCAIAGYYRI ATEPDHIRRE LALDRTNADV SSLLRGAKLS
GLKARVVRIR NRKRLSRLPV PAIIRLKDHS FSVYSGVSPA GNFRLVDPVS RIAQDLPYEQ
FTDTVTDEII LVQRQFRGSG IDPTTFGFRW FLPSIWRYRS PIAHVLIASL FVQIFALVTP
LFFQVIVDKV LVHKGYSTLL VIVAGLAVIG LFDVVLQFLR TYALSHTTNR IDVELGQRLF
RHLLNLPLGY FETRSAGQTV ARMRELETIR AFLTGQGLFS AIDLIFTIIF IAVLLAYSVN
LTVIVLISIP IYLVISALFR PALRDTIKAK FDRGAESQQF LVEAVVGIQT LKASAVEPMM
RAQWEERLAA YVRTSFSATL LAAGGQNAIQ YVSKLTSAAL MLFGAKAVID GDLTVGELVA
FNMIAGQVAQ PILRLSQIWQ DYQQVQISVD RLGDILNAPP EQTSKASAGL PPPKGAIELR
NVSFAYRPGA HDVLQDVSLA IRPGEVVGIV GSSGSGKSTL TKLVQRLYTP REGQILVDGI
DIAQTDPAWL RSNVGVVLQE NLLFNRTIHD NIAFANPAMP RAAVMNVARL AGADEFINRL
PMGYDTQIEE RGANLSGGQR QRIAIARALA TNPRILIFDE ATSALDYESE RVIQTNMRQI
VRGRTVIIIA HRLATVRPCN RIVGMAEGRI VEVGSHEDLL RRQGGLYARL WALQTDQAMA
S
|
|---|
| |