Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_5066 |
Symbol | |
ID | 6114059 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | + |
Start bp | 5610235 |
End bp | 5610933 |
Gene Length | 699 bp |
Protein Length | 232 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 641624881 |
Product | GntR family transcriptional regulator |
Protein accession | YP_001751911 |
Protein GI | 170724223 |
COG category | [K] Transcription |
COG ID | [COG1802] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.219495 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.372207 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCCGAGA AAATCAAACT GAGCAATGTG CTGGCGAGCG AACAGCTACC GGCGAACCTG GCCCGTGGCG TGATCGAAGA ACGCTTGCGC AGCGCCATAC TCGATGGCCG CCTGCCGCCC GGTACCGCCG TGCGCCAACA AGAGCTGGCG ACCTTGTATG GCGTCAGCCG CATGCCTGTG CGTGAGGCGC TGCGCCAGCT GGAAGCGCAA TCACTGCTCA AGGTGGAAAT GCACAAGGGC GCGGTTGTGG CGCCTTTGAT TGGTGAAGAT GCAGTCGACA CTTATGCGTT GCGGGTTTTG CTCGAGTCCG AGGCCCTGCG CCAATCCATT CCCCTGCTCG ATGCCGATGA TATCGCCCGT GCACGTGGTT ACATCCGGCA ACTGGAAAAC GAGACGCGCC ACGCCGAAAT CGGCCGCCTC AATCGGCTGT TCCACATGGC CCTGTACGGC AAGGCTCAGA ACCAGAAGCT ACTGCGCCTG ATCGAGGACG AGCTCAACGA GGAAGAGCGC TTCCTGCGCT TTCATCTATC GTCGATGGGC TTGGGCAAGC TGACCCAGGA CGATCACAAC GCACTGGCGG ATGCAGCCAG TGACAAGCTG GTCGACGAGG CAGTGAGGGT GCTGGAGCAG CATCTGAACA ATGGTGCGCG GGTTATCAGG AATTACCTGG ACAAGCAGGC AGTCCAGCCA ATGCCATAA
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Protein sequence | MAEKIKLSNV LASEQLPANL ARGVIEERLR SAILDGRLPP GTAVRQQELA TLYGVSRMPV REALRQLEAQ SLLKVEMHKG AVVAPLIGED AVDTYALRVL LESEALRQSI PLLDADDIAR ARGYIRQLEN ETRHAEIGRL NRLFHMALYG KAQNQKLLRL IEDELNEEER FLRFHLSSMG LGKLTQDDHN ALADAASDKL VDEAVRVLEQ HLNNGARVIR NYLDKQAVQP MP
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