| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_2280 |
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| Symbol | |
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| ID | 6111233 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | + |
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| Start bp | 2541063 |
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| End bp | 2545274 |
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| Gene Length | 4212 bp |
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| Protein Length | 1403 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 641622075 |
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| Product | AAA ATPase |
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| Protein accession | YP_001749149 |
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| Protein GI | 170721461 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1112] Superfamily I DNA and RNA helicases and helicase subunits |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.00184905 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.00000493751 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | GTGCCTTATC TCAGTAAGCG GGTTATCAGC AACTATTTTC GTACCGATTG TCCGCGCCAG
CTGGCGTTGA TGCTCTATCC CCACAACAAA CAGTACGAGC CTGCGCGCAG CGTGCTTGAA
ATGCCGCCCA AGGCGGTGGG GCGTACGGGC ATGAACGCGC TGACTGAGGA GGGTGGGCGT
TGGGAGCAGG CCAAGCTCCA TGACCTCGAG GTAACCTTTG GTGGTAGGGC GGTGCTTGGT
ATAAAGACCA ATAACGACTA CCAAGACCAA AAACTGTCGA CGGTCATCGC GCACGCATTG
CCCGGTATGT TCCTCGTACG GCCGGAATTC CAGGTTGGTG AGACGTTTAC GCGAGCGTTG
ACCATTGACG AGATGAGTGT CACTAACGAA CTCGCCTTTG CAAACCTCAT TCCCGATTTG
ATCCAGGTGA TTGCACCGGA GGACATTGAG CGGATCGTTC ACGCTGATGG CACCGTGCAT
CCTGCCGATG GTCGGGTAGG GCTTCGGGTC ATTGACATCA AAATGACAGC CGAACCTAGT
GCCTCGTATT TTGCCGAGAT CACCTACTAC TCGCTTGCGC TCGCCGGCTG GCTGCAGGAT
CAGGGATTCG CCGACCGATT CGCCGTGGTT GCCGAGGCGG CGATCTGGCC TGGTTCGCAC
GATGCGGCTG AGATCGTCAA GCTACAAGCG GCCAGGCGCG AGGAGGGTAG GCAAGCCTCG
GATGCGGAGC TGCGAGCAGC TCTGCAACTG GACATCGAAA CCCTGGAAAT CGAAGTATTC
GCTCCGCGGC TGCGTTACTT TTTCAACGTT GAACTGCGTA CCGCCCTCCA GAGGCCTTGG
CGCGGCCAGG ACTATCACGT CAGTACCGCT TGCAGCGGCT GTGAATATTT GGGCTACAGC
TGGAACCCGG ATGTTGTGCC TCATGCTGAG CATTGCATAC CGCGTGCAGC ATCGGATGGT
CACCTGAGCT CGATTGCTTT CTTGCCTCGG GGTGCACGAC GGGCCTTGGG CGATCGTGCA
GTGACCCAGG CAGAAACCTT GGCGGGCCTA TCTGCTGATG ATGAGGCGTT TGATTGTCAC
CCGCGGTTAC GAGCGGCGCG CACGGTCGTG GCGGGCAGGG CACAGGCCCT CTCTACTAAA
GTCAGCAGTA TCCCTTCAGG CTCGGGTACC TCTGCAGTGC TGCCTAGCTG GTCGGACCTC
AGCCTGTACC TCTCCGCAGA CTTTGACGTC GGAAGTGGTT TGACGCTGGC GTTCGGCATA
GGCGGTTTCT CCAGGATTAA TGGCGAGACC GAGCGCGTCG ATGCGCAGGT ATTCGTGAAT
GACATTCGCA GCATTGAGAG CGAGCGCCGA GAGCTGCTGA ACTTCCTGAC TTACCTGAGC
AAAGCGCTGA GCGCTGCGCT GAAGGCAGAG CCCAAGGCTA CTGTCCAGAT CTACCTCTGG
GACTCGGTGA CGTATGAGCA CCTAATCCGG GTCATTGGCC GCAACTTGCA GTACATCATG
GCCGATAGCA ACCTTAAAAA GCTGGCCTGG CTGTTCCCTG GCGACGAGTT GATCGAAAAC
GCAAGCTACC GCTCCGCAAA TGCGCCCATC ACCATCGTGC GAAACGCGGT GCAAGCCTTG
GTCGCGGCCC CGATTCCCCA TTACTACTCG TTGTTGGCTC TGGCGCGCGA GTTCCGGCCG
CCGATCAAGC CTGACCAAAC ACCCTTCGAG TTCCGAGTTC CCACCATTTT CGAGGATCCC
TTATCCGACC AAGTGCCGTC AGAGCGGGCT CATGAAATTT GGACCCGGAT GGGTGCCCCC
CGCCCTTGGA GTCAGCAGGT CACCCAGCTC AGATCGACGG TCATTACCAA GTTGCGCGCG
ACGGCGTCGA TTGTTAATCG CTTGCGCGTG GAGCTAAAAG GTGCTCTGCG CAGCCGATCG
CCGAAGATCG CCGATATCAA AGCACCGTCT ATGTTGGACA AGGTCAGCGC GGATGGGCAG
GTCTGGTTTG CTTACGCCAA ACTGAACGCT CAGGTGGCGG CACTTGAACA AACCATCACC
ATGGCCACTC CGGTACACGA GCGCGAGGCG CGCTACCTGG CGGCCCGACT CGAGCGCGAG
CTGGTGGGGA CTGAGGCTCA TCAGGCAGCA ATGTCGCTGG GGGTCGCTCA AGCGCCCGGC
GTTCGGATTT ATCGGCTTGG TCAGCATTCT CGGGAAGCGA AGTTCGAACC GGGCGACTTC
CTCTGCGCTC TGTCGCCGGC GTCCATGGGC GATTTTCATA TGAAGCGGGT GGGTGATGTG
ACCGGCGGTC AACCGTTGCC ACCCGGGATC AAGCTGAACC CGTACGGTTA CGCAACATCG
TTAACCCGAA CCAAGATTCT GGCGATTGAC CGTGACAAGC GTTGTATTGC AGTGTATCTG
GACCCGGAGG TTGATGATTT TCTGCGCTCG ATCGAACCGA ATCTAGATTT GAGTCGAGAC
GTGGTGTTGG ACAAGTTGGT GACCGACTAC TTGACCAAAC GCTTGGAAAC GGCACTGAAG
GCAATTGGTA ATCCCCCGCT CGCCGTAAAG GCGGGAATCT CGACTTTGCA GGTACTGGGC
AAGCCGGCCG TCAAGAAAGT CAGCGCTTCG GTCCCGGTCG AAGAGGTGTT GTGGAATACC
GCAACGCTGG CACATACCCC GACGGAGCGA AGCGTAACCA GGATTCGACC GCGCCTCGAA
GGCTATGGCG TCAGATTGAA TGACAGCCAG TGGGTTGCCC TGCGTCAGGC GGTGGAGCAG
CGCCTGGCAT TAATCTGGGG GCCTCCGGGT ACTGGAAAGT CCGAGACGTT GCGGGCGATT
CTGCTCGGAC TGCTAGTGGA CTCGCAGCAA ACGGAGAATC CAATACGTAT TCTGGTCACC
AGCAATACCT ACGATGCCAC CGACAACGTC GTGGTGAAGG GTTTCAAAAG GATCTTGGAG
TTAGGGGCGC AAGAGACCGG GGCGGTGCAG TTGGTACGCT TGCGTTCTGG TGCTAAGGCG
GCGTCGAAGG AGCTGGCAGC GGAGATTGAT CTGCTGAATG ATCCTATGGA TCCCAAAGTT
CGCGAGTTGC ATGCGACGCT GCGAGCGAAA CTCTGCAGTG TCATCGTGTC GGCACCGCCG
CAGCAGGTCA CCAAGTTCGC GGCTGTCAAC AACAATGCGG CAGAACCATT GTTTGATGTT
GTGTTGATCG ATGAAGCTTC GCAAATGGAT ATGGCGAATG CAGTCCTCGC CCTGGCTCCC
ATTGCATCCA ATGGCGCCGT GATTGTAGTG GGTGACCCTA AGCAATTGCC GCCTATTCAG
CAAGTTGAAC CGCCCGTTGG TCTCGAGAAA CTGGTGGGTT CGATTTATGA CTTTGTGGCT
GATCATCGCG GTGTTAAACC GGCCAGTCTG TTGGAAAACT ACCGTTCCAA TGCGGCCATT
GTGGGGTTCA GCCGCTTTGC GGGGTACCCG GCAGAATTGA ATGCATTCTT CCCTGATTTG
CGGATCGCAA CAGACGTACC GCTACCGAAG GTGCGCCCCC AGGATTGGCC ACCCAGTATT
GAGTTCGCCG AAGAATTGTC GATGCTGCTG GATCCGGCGC AACCTATTTC CGCATTTATT
TACCCTGAGG GTAGAAGCAG TCAATGGAAC GACTTCGAGG CGCAAACGGT CGCGGCAATG
CTCGTGCTGC TGCGGCGGCA TCTTATGAAG AATTTGGCCA ACCTACCGGA TGCAGTCGGG
AACGATCTGC ATGATGCGGA AAGTTTTTGG AAGAGCGGCG TCGGCGTGGT CACGCCACAC
CGAGCACATA AGGCACTGGT GGTATCTCGT TTGCAGGCAT TATTCGGACC AATGGGTGAC
GACGCTCAGT TGATTCGTGA TGCCGTGAAC ACCGTCGAAC GTTTTCAAGG CCAGCAGCGA
GATGTCATCA TTGCCAGCTA TGCATTGGGA GACCCCGATG CCATTGCCGA CGAAGACGAA
TTTCTACTGT CACTCAATCG CTTCAATGTT ATGTCGTCCC GACCGCGAGC GAAGTTGATC
GTACTGGCCA GTCAGGAGGT CATCAACCAT CTGCCGGGTG ATATCAAGAT CATGCGCGAC
TCCAGATTGC TCAAGTACTT CGCCGAGACT TTCCTCGACA GCCGCGCGGA CATGTCGATA
CCATTTAAAG AGGGCGAGGG GATCATCAAC CGACGTCAAG GCTCGTTCCG CTGCAAGCAG
CCTCAGTCGT AA
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| Protein sequence | MPYLSKRVIS NYFRTDCPRQ LALMLYPHNK QYEPARSVLE MPPKAVGRTG MNALTEEGGR
WEQAKLHDLE VTFGGRAVLG IKTNNDYQDQ KLSTVIAHAL PGMFLVRPEF QVGETFTRAL
TIDEMSVTNE LAFANLIPDL IQVIAPEDIE RIVHADGTVH PADGRVGLRV IDIKMTAEPS
ASYFAEITYY SLALAGWLQD QGFADRFAVV AEAAIWPGSH DAAEIVKLQA ARREEGRQAS
DAELRAALQL DIETLEIEVF APRLRYFFNV ELRTALQRPW RGQDYHVSTA CSGCEYLGYS
WNPDVVPHAE HCIPRAASDG HLSSIAFLPR GARRALGDRA VTQAETLAGL SADDEAFDCH
PRLRAARTVV AGRAQALSTK VSSIPSGSGT SAVLPSWSDL SLYLSADFDV GSGLTLAFGI
GGFSRINGET ERVDAQVFVN DIRSIESERR ELLNFLTYLS KALSAALKAE PKATVQIYLW
DSVTYEHLIR VIGRNLQYIM ADSNLKKLAW LFPGDELIEN ASYRSANAPI TIVRNAVQAL
VAAPIPHYYS LLALAREFRP PIKPDQTPFE FRVPTIFEDP LSDQVPSERA HEIWTRMGAP
RPWSQQVTQL RSTVITKLRA TASIVNRLRV ELKGALRSRS PKIADIKAPS MLDKVSADGQ
VWFAYAKLNA QVAALEQTIT MATPVHEREA RYLAARLERE LVGTEAHQAA MSLGVAQAPG
VRIYRLGQHS REAKFEPGDF LCALSPASMG DFHMKRVGDV TGGQPLPPGI KLNPYGYATS
LTRTKILAID RDKRCIAVYL DPEVDDFLRS IEPNLDLSRD VVLDKLVTDY LTKRLETALK
AIGNPPLAVK AGISTLQVLG KPAVKKVSAS VPVEEVLWNT ATLAHTPTER SVTRIRPRLE
GYGVRLNDSQ WVALRQAVEQ RLALIWGPPG TGKSETLRAI LLGLLVDSQQ TENPIRILVT
SNTYDATDNV VVKGFKRILE LGAQETGAVQ LVRLRSGAKA ASKELAAEID LLNDPMDPKV
RELHATLRAK LCSVIVSAPP QQVTKFAAVN NNAAEPLFDV VLIDEASQMD MANAVLALAP
IASNGAVIVV GDPKQLPPIQ QVEPPVGLEK LVGSIYDFVA DHRGVKPASL LENYRSNAAI
VGFSRFAGYP AELNAFFPDL RIATDVPLPK VRPQDWPPSI EFAEELSMLL DPAQPISAFI
YPEGRSSQWN DFEAQTVAAM LVLLRRHLMK NLANLPDAVG NDLHDAESFW KSGVGVVTPH
RAHKALVVSR LQALFGPMGD DAQLIRDAVN TVERFQGQQR DVIIASYALG DPDAIADEDE
FLLSLNRFNV MSSRPRAKLI VLASQEVINH LPGDIKIMRD SRLLKYFAET FLDSRADMSI
PFKEGEGIIN RRQGSFRCKQ PQS
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