Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_0231 |
Symbol | |
ID | 6109010 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | + |
Start bp | 245128 |
End bp | 246120 |
Gene Length | 993 bp |
Protein Length | 330 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 641619987 |
Product | two component LuxR family transcriptional regulator |
Protein accession | YP_001747106 |
Protein GI | 170719418 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG4566] Response regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.523638 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.456368 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCCGAT TAGGCAATGC CCAAGTATCG TTGGAGCGGC GAGAAGCCTT TGTCGACGGC AAGCCGGTCC CATTGGGTGG GCGCGCGTTC GAGGTACTGG CCACTTTGAT CAAGGCCAAG GGCCGCGTGG TCGGCAAGGA CGAGCTGTTC AGCGAGGTCT GGGCGGGCAC GGTGGTTGAA GACAACAACC TGCAGGTGCA GATCTCTTTG CTGCGCAAAG CCTTTGGCGC CCCGGGTCTG ATCCAGACGG TACCACGCCG AGGCTACCGG CTGGCTGTCG ACGTTGTCCT AGATCTGCCA TGCACTGCGC TGGGTAGATC GCCCTTGAAG GATGCGGCAG AGGCCCTCGT GCCTCTGGGC GACAGTGCGA GCGTACCGGT GCTCGTGGTG GATGACGACC CGTCGGTGCG CAAGGCTCTG GCGCGGCTGT TCCGTTCGCA GGATATCGCG CATCGGTTGT ATGCCTCGGC CGAAGAATTG TTCGAAGGCC AGGTCGAAAC GCCCTACGCG TGCCTGTTGC TGGACATGAA CCTACCGGAG GCCAGCGGGC TGGAGGTTCA GGATGTGCTG CGTCGTCTCG ACCTGCCCTG GCCGATCATC TTCATGACCG GTTACGGCAC CATCCCCCTG ACGGTGCAAG CCATGCGCGC AGGTGCGGTG GAGTTTCTGA CCAAGCCCTT TGACGAAGAC CAGTTGCTGG CGGTACTCGA CGCTGCGCGC GCACGTGCCC TGGTGCAAGG TCGCAAATGG CATCAAGCGC GGCAGGTGAA GCAGAAATAC CAGCGCCTTA CCCAGCGTGA GCGCCAGGTG TTCTCGTTGG TGGTCGATGG CCTTTCGCAC AAGCAGATTG CCAAGCAGAT CGGCACCAGT GAGGTGACGA CCAAGGTCCA CAAGAAGAAC ATCATGAACA AGATGCAGTC CCGCTCACTG GTCGAACTGG TAGCCATGCA CCACGTCATC GAATCGCGTG TCGAGGGCCA GGGCCCGGCA TGA
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Protein sequence | MIRLGNAQVS LERREAFVDG KPVPLGGRAF EVLATLIKAK GRVVGKDELF SEVWAGTVVE DNNLQVQISL LRKAFGAPGL IQTVPRRGYR LAVDVVLDLP CTALGRSPLK DAAEALVPLG DSASVPVLVV DDDPSVRKAL ARLFRSQDIA HRLYASAEEL FEGQVETPYA CLLLDMNLPE ASGLEVQDVL RRLDLPWPII FMTGYGTIPL TVQAMRAGAV EFLTKPFDED QLLAVLDAAR ARALVQGRKW HQARQVKQKY QRLTQRERQV FSLVVDGLSH KQIAKQIGTS EVTTKVHKKN IMNKMQSRSL VELVAMHHVI ESRVEGQGPA
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