| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcSMS35_2333 |
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| Symbol | |
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| ID | 6145767 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Escherichia coli SMS-3-5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010498 |
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| Strand | + |
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| Start bp | 2366292 |
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| End bp | 2368052 |
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| Gene Length | 1761 bp |
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| Protein Length | 586 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 641617207 |
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| Product | putative helicase |
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| Protein accession | YP_001744380 |
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| Protein GI | 170682105 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG1061] DNA or RNA helicases of superfamily II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00564696 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 0.0326725 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTTTTA CACTCCGCCC ATATCAGCAA GAAGCCGTGG ATGCCACGCT CAACCATTTT
CGTCGTCATA AAACCCCTGC CGTAATCGTG CTGCCCACCG GTGCAGGTAA AAGCCTGGTG
ATAGCGGAAC TGGCGCGGCT GGCACGTGGT CGCGTGCTGG TGCTGGCACA CGTTAAAGAA
CTGGTGGCGC AAAACCATGC AAAATATCAG GCGCTGGGGC TGGAAGCCGA TATTTTTGCC
GCCGGGCTAA AGCGCAAAGA GAGCCACGGT AAAGTGGTAT TTGGCAGCGT GCAGTCGGTC
GCCCGTAATC TTGATGCCTT TCAGGGTGAA TTTTCGCTGT TGATTGTCGA TGAATGTCAC
CGTATTGGTG ACGATGAAGA GAGCCAGTAT CAGCAAATCC TCACTCACCT GACCAAAGTG
AATCCCCACT TACGCCTGCT GGGGCTGACT GCCACGCCTT TTCGACTGGG CAAAGGCTGG
ATTTATCAGT TCCATTATCA CGGCATGGTA CGCGGCGATG AGAAAGCCCT TTTCCGTGAC
TGCATTTATG AGCTGCCGCT GCGTTATATG ATTAAACACG GCTATCTGAC GCCGCCAGAA
CGACTGGATA TGCCAGTAGT GCAATACGAT TTCAGCCGCT TGCAGGCACA GAGTAACGGG
CTGTTCAGCG AAGCCGATCT CAACCGTGAG CTGAAAAAAC AACAACGTAT TACCCCGCAC
ATCATCAACC AGATTATGGA GTTTGCTGCA ACGCGCAAAG GGGTGATGAT TTTCGCCGCC
ACCGTTGAAC ACGCAAAAGA GATTGTGGGA TTACTACCCA CCGAAGATGC TGCACTGATT
ACTGGCGACA CCCCCGGCGC TGAGCGCGAT GTGTTAATTG AAGATTTTAA AGCCCAGCGT
TTTCGCTATC TGGTCAACGT CGCGGTACTG ACCACCGGAT TTGACGCCCC GCACGTCGAT
CTTATCGCCA TTCTGCGCCC TACCGAATCG GTGAGTCTTT ACCAACAAAT TGTCGGGCGA
GGTCTGCGTC TCGCTCCTGG CAAGACTGAT TGCTTAATTC TTGATTATGC GGGTAATCCT
CACGATCTCT ACGCGCCGGA AGTTGGTACA CCGAAAGGCA AAAGTGACAA CGTTCCGGTA
CAGGTTTTCT GCCCTGCCTG CGGTTTTGCC AACACCTTTT GGGGGAAAAC GACCGCCGAC
GGGACATTGA TTGAACACTT TGGTCGCCGC TGTCAGGGAT GGTTTGAAGA TGACGACGGT
CATCGCGAAC AGTGTGACTT CCGTTTCCGT TTTAAAAATT GCCCGCAATG TAACGCAGAA
AATGATATTG CCGCCCGCCG TTGCCGCGAG TGTGACACCA TTCTGGTTGA CCCGGATGAT
ATGTTAAAAG CGGCGCTACG ACTGAAAGAC GCGCTGGTAT TACGCTGTAG CGGCATGTCT
TTGCAGCATG GGCACGACGA AAAAGGCGAA TGGTTGAAAA TCACCTATTA CGATGAAGAC
GGCGCGGATG TGAGTGAGCG TTTCCGTCTG CAAACGCCCG CCCAGCGAAC TGCCTTCGAG
CAGCTTTTTA TCCGCCCGCA TACGCGCACA CCGGGCATCC CGCTGCGCTG GATCACCGCC
GCCGATATCC TCGCCCAGCA AGCCTTATTG CGACACCCGG ATTTTGTCGT TGCCCGCATG
AAAGGTCAGT ACTGGCAAGT GCGTGAAAAA GTGTTCGATT ACGAAGGTCG TTTTCGTCGG
GCGCACGAAT TACGCGGTTA A
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| Protein sequence | MIFTLRPYQQ EAVDATLNHF RRHKTPAVIV LPTGAGKSLV IAELARLARG RVLVLAHVKE
LVAQNHAKYQ ALGLEADIFA AGLKRKESHG KVVFGSVQSV ARNLDAFQGE FSLLIVDECH
RIGDDEESQY QQILTHLTKV NPHLRLLGLT ATPFRLGKGW IYQFHYHGMV RGDEKALFRD
CIYELPLRYM IKHGYLTPPE RLDMPVVQYD FSRLQAQSNG LFSEADLNRE LKKQQRITPH
IINQIMEFAA TRKGVMIFAA TVEHAKEIVG LLPTEDAALI TGDTPGAERD VLIEDFKAQR
FRYLVNVAVL TTGFDAPHVD LIAILRPTES VSLYQQIVGR GLRLAPGKTD CLILDYAGNP
HDLYAPEVGT PKGKSDNVPV QVFCPACGFA NTFWGKTTAD GTLIEHFGRR CQGWFEDDDG
HREQCDFRFR FKNCPQCNAE NDIAARRCRE CDTILVDPDD MLKAALRLKD ALVLRCSGMS
LQHGHDEKGE WLKITYYDED GADVSERFRL QTPAQRTAFE QLFIRPHTRT PGIPLRWITA
ADILAQQALL RHPDFVVARM KGQYWQVREK VFDYEGRFRR AHELRG
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