Gene EcSMS35_0325 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcSMS35_0325 
Symbol 
ID6145276 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli SMS-3-5 
KingdomBacteria 
Replicon accessionNC_010498 
Strand
Start bp330089 
End bp331231 
Gene Length1143 bp 
Protein Length380 aa 
Translation table11 
GC content44% 
IMG OID641615221 
Productoxidoreductase, FAD/FMN-binding 
Protein accessionYP_001742429 
Protein GI170680739 
COG category[C] Energy production and conversion 
COG ID[COG1902] NADH:flavin oxidoreductases, Old Yellow Enzyme family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000687106 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value0.103488 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAAATA AACACTCATC ATTGTTTTCT CCTTTTATGC TGACAGAAAA AATAAAGCTA 
CGTAATCGTA TCGTTATGGC TCCTATGACA ACCTGGTCAG CTAATCCTGA TGGAACCATC
TCTGAGCAAG AACTCGAATT TTATAAACGT CGCTCACAAA ATGTTGGTTT AGTAATAACA
GGATGCACCT ATGTCACGCC AAGCGGCATT GGGTTTACTC ATGAATTTGC CGCGTATGAC
GACCGTTTCA TTAACAGCCT TGAAAAGTTA GCAGCTGCAG CCAAAAGTGG CGGTGCTCCG
GCTATTTTGC AGATTTTCCA CGCCGGTAAT AAAGCCATCC CGGAGCTTGT GCCAAATAAC
GATGTTATTA GTGCCAGCGC ATCAAGTGTA AAATCTGGTG ACTTTATGAA GAGAGTGGTA
CAAAGCAGGG AAATGACTGA AAACGAAATT CAGGAAACCA TTAGAGCATT CGGAGATGTC
ACAAAAAGGG CGATTAAAGC AGGTTTTGAT GGCGTTGAAC TTCATGGTGC GCACGGATTC
CTTCTGCAGA ATTTCTTCTC CCCTCTATTT AACCAGCGTA ATGACCGATG GGGAGGAGAT
CTTGAAGGAC GTATGCGCTT CCCGCTGGCC GTATTACAGG AAGTAAAAAA TGTAGTCTAT
GAATATGCGA CAAAGCCCTT TGCTATCGGT TACAGAATAT CTCCTGAAGA ATCTGTAACA
GGGGGGCTGC GGATAGAGGA TACTTATAAA CTCCTTGATC GGCTCATTTC ATCCGGTATT
TCGTATATAC ATACCTCGCT GGTCAGTATT AACGATAGCT ACCCTGTTGA GTCGCCAAAT
GGCCCCCGAA CAATTGAATT GATTTTAAAT CATATTGCAG GCAGAGTGCC GGTAATCGCC
GCAGGTAAAA TACGCACACC GTCTCAGGCT CAAGAAGCAA TTTCCGCTGG CCTGCCACTT
GTTGCGATCG GTAAAGGGCT GGTGATAAAT CCAGAATGGG TGACTTTAGC TGAATCAGGT
AGAAGTCATG AAATTCAAAC AGCCCTTAAT CCACAACGCG TTCCTGAATT AACCATTCCG
GATAAACTAT GGGATCAAAT TCAGGCATCG AAAGGAACTG GCTGGTTTCC GTTAATAGAT
TAA
 
Protein sequence
MTNKHSSLFS PFMLTEKIKL RNRIVMAPMT TWSANPDGTI SEQELEFYKR RSQNVGLVIT 
GCTYVTPSGI GFTHEFAAYD DRFINSLEKL AAAAKSGGAP AILQIFHAGN KAIPELVPNN
DVISASASSV KSGDFMKRVV QSREMTENEI QETIRAFGDV TKRAIKAGFD GVELHGAHGF
LLQNFFSPLF NQRNDRWGGD LEGRMRFPLA VLQEVKNVVY EYATKPFAIG YRISPEESVT
GGLRIEDTYK LLDRLISSGI SYIHTSLVSI NDSYPVESPN GPRTIELILN HIAGRVPVIA
AGKIRTPSQA QEAISAGLPL VAIGKGLVIN PEWVTLAESG RSHEIQTALN PQRVPELTIP
DKLWDQIQAS KGTGWFPLID