| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TRQ2_1785 |
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| Symbol | |
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| ID | 6093236 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermotoga sp. RQ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010483 |
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| Strand | + |
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| Start bp | 1798500 |
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| End bp | 1799768 |
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| Gene Length | 1269 bp |
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| Protein Length | 422 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 642488982 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001739799 |
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| Protein GI | 170289561 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00880] Multidrug resistance protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00132489 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAGTTA TATTCATTCT GATTCTCATG GTTCTACTGA ACGCGGATCA GATGGTGATG
TCTCCAAACA TAGGAGCGAT AGAACAGGAA TTCAACATCA CGGATGCTCA GATAGGTCTC
GTTGCTTCGT CTTTCACGGT GATAGGAGCC CTTGTGAGTC TCGTATGGGG GTACCTCGCC
GACAGATACA GCAGAAAAAA CCTGCTCATC TACTCCATTC TTGTCGGTGA GATTCCCTGT
CTCATGAGCG CATTTTCTCA TTCTTACGGT GAACTCTTTT TCTGGAGAGC ACTCACCGGA
ATAGGTGTGG GAGCGTCCTT TCCCATCGTT TATTCGATGA TAGGAGACAT GTTCGACGAA
GTGAAGAGAG GAAAAGTCGT GGCTCTCATA TCTTCTGCGA TCTCCATAGG AAGTGTTCTT
GGAATGATCG TTGGAGGCTT TTTGGGACCG AAATACGGCT GGAGAGTTCC CTTCATCGTG
GTTTCTGTTC CAAACATCGC CCTTGCGATT TTATCCATTT TCGTTCTGAA AGAACCAAGA
AGAGGTGCTT TTGAAAAAGG AATTGGAGAG CTCGTTCAAT CTGGGTATGA GTACCCGAAA
GCGCCAAAAC TCTCTGATTA CGCAAAACTC GTGAAGGTGA AAACGAATCT TCTTCTGTTC
TTTCAGGGCA TAGCAGGGAC GATTCCCTGG GGTGCCATTC CTTATTTTCT CGTGGAATTC
TTCAGAAGAG AAAGAGGTCT TTCGGTGGAG ACGGCCACCC TCGTTTTCCT CGTGTTCGGT
CTTGGAAATA TCGTGGGGAT CATCCTTGGA GGGCTGTGGG GAGCAAACAT CTACGCGAAA
TCCAGACCAT TCCTACCGCT GTTTTGCTCG ATCACAACCG CTCTTGGAAC TTTCTTCACT
GTTATGACCC TGGACTACAC AGGAAGTCTT CTCGTGCTCA TGTTACTTGG TTTCGTTGCT
TCTTTCACCG CGAGCCTCAC GGGCCCGAAC GTGAAGTTCA TGCTCTTGAA CGTCAACGAA
CCCCAGGAGA GGGGAAGAAT ATTCTCCATA TTCAACCTCA CTGATTCGCT CGGAACGGGA
TTTGGAAAAT TCGCGGGAGG AGTGATGTCC GTTGCACTTG GATCTCTTGG GGCTGCCTTG
AAGGTCTCCG CGTACTTCTG GCTTATCTGT GCGGTGCTGC TTTTCGTTCT GGTTTTTTAC
TTTGCAAAAG ACGTGGAAAG GCTTCAGAAG ACCATGATAG AACTTGCCAA GAATTCCCAG
ACAAGATGA
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| Protein sequence | MAVIFILILM VLLNADQMVM SPNIGAIEQE FNITDAQIGL VASSFTVIGA LVSLVWGYLA
DRYSRKNLLI YSILVGEIPC LMSAFSHSYG ELFFWRALTG IGVGASFPIV YSMIGDMFDE
VKRGKVVALI SSAISIGSVL GMIVGGFLGP KYGWRVPFIV VSVPNIALAI LSIFVLKEPR
RGAFEKGIGE LVQSGYEYPK APKLSDYAKL VKVKTNLLLF FQGIAGTIPW GAIPYFLVEF
FRRERGLSVE TATLVFLVFG LGNIVGIILG GLWGANIYAK SRPFLPLFCS ITTALGTFFT
VMTLDYTGSL LVLMLLGFVA SFTASLTGPN VKFMLLNVNE PQERGRIFSI FNLTDSLGTG
FGKFAGGVMS VALGSLGAAL KVSAYFWLIC AVLLFVLVFY FAKDVERLQK TMIELAKNSQ
TR
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