Gene TRQ2_1022 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTRQ2_1022 
Symbol 
ID6092452 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameThermotoga sp. RQ2 
KingdomBacteria 
Replicon accessionNC_010483 
Strand+ 
Start bp1069557 
End bp1070036 
Gene Length480 bp 
Protein Length159 aa 
Translation table11 
GC content41% 
IMG OID642488218 
ProductCRISPR-associated Cas4 family protein 
Protein accessionYP_001739055 
Protein GI170288817 
COG category[L] Replication, recombination and repair 
COG ID[COG1468] RecB family exonuclease 
TIGRFAM ID[TIGR00372] CRISPR-associated protein Cas4 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGATCT CTGGAGCTGT TGTTTTGAGT TACATAAATT GCAAAAGAGA AGCGTGGTTG 
ATGGCACATG GAGTGCTTCC AGATCAGGGA AACATGCACA TAGAGATAGG AAGGTTCATT 
CATGAAGATT ACAACGACTC TATCGTGCTT CCTGGTATGA AGATCGACAC CATATTCGAA 
AGAGAAGGAG TGAAAGTAAT TGGTGAAGTG AAAAAATCAT CCGCTTCGAA AAAGGGAGCT 
GAGTATCAAC TCCTTTACTA CCTTTACAGG CTCGAAGAAA AAGGTGTGAA GGCAAAGGGA 
GAGATCATAG TACCAAAAGA GAACCAAAGA ATTCCAGTTG AGCTCACAGA GGAAAACAGA 
GAGAAAATTA AAAAGGTTCT CGAGGAAGTA TCTTCCCTTC TTGAAGAAGA AACTCCTCCA 
CCAGCCAAGA GAAAGGGAAT TTGTAGAAAG TGCGGTTATG AACTTTTCTG TTTTTCGTGA
 
Protein sequence
MMISGAVVLS YINCKREAWL MAHGVLPDQG NMHIEIGRFI HEDYNDSIVL PGMKIDTIFE 
REGVKVIGEV KKSSASKKGA EYQLLYYLYR LEEKGVKAKG EIIVPKENQR IPVELTEENR 
EKIKKVLEEV SSLLEEETPP PAKRKGICRK CGYELFCFS