Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TRQ2_0593 |
Symbol | |
ID | 6092009 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermotoga sp. RQ2 |
Kingdom | Bacteria |
Replicon accession | NC_010483 |
Strand | - |
Start bp | 599569 |
End bp | 600810 |
Gene Length | 1242 bp |
Protein Length | 413 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 642487778 |
Product | major facilitator transporter |
Protein accession | YP_001738629 |
Protein GI | 170288391 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.00370301 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAATGAGC TCTTACACTG GAAGAGGAAC TTCTTCCTTC TTGCCCTCGG AAGGTTCGTA TCGATTCTTG GAAGTTCCAT TCAGGCGGTT GCGATTCCTC TTTTTGTACT GGATCTGACA CACTCTGGAT CTGCTGTTGC CCTGATGACC GTAGCCTACA TGGTTCCGAG GATCCTTTTC ACACCCATAG CCGGGATCGT GGGAGACAGG GGAGATAGAA AGTTTCTCAT GGTCTCGATG GATTTTCTGA GGGGATTTCT CATCTGTTTT CTGGCCCTTC TTGCGTTCAG AAACTCCGTC ACCCTTCCCG TTCTCTACGT TTCTCAGATA GCGATGGCTG TCATGGACAA TCTCTTCGAC ATACCGACAG GTGCGATGTT TCCCGATATC GTTCCTCAGG ATTTTCTCAT GAGAGCCAAC TCCATCATGG GTATGGTGAG GATCTTTCCA CAGATCCTGG GCCCCGCACT GGGAGGAGTG ATCTACGGAT TCTACGGTAT AGCGATCGTT TTTCTTGTGA ATGGGGTGTC TTTTGTCCTC TCTGCTATCA GTGAGATCTT CATCGTTTAC AGCCGAAAGG TGGAGAAAAA GCCAGCAAAA TTCTCTCAGA TCCTTGAAGA TCTCAAAGAA GGATTTCTCT TCATCTGGAA CCACGAGCTC ATACGAACCA TTCTGATCTT CGCACTTTTT CTGAATCTGC TCATCTCTCC GCTGTTCATG GTGGTGTATC CTTACACGAT CAGGGAAGTG ATGAAATTTT CGGCTCAGGA ATTTGGTTTC CTGGAGACTT CCTTCACCTT AGGGGCGCTT CTTGGGAACT TTCTGATCGC ATCGTACCTG TCAAAGAAGA ACATGTGGAA GGCCATGAAG ATTTCTATCT TTCTTTTTGA ACTTCCCATC GTCTTCCTTG GCTTTCTCGT CATGCCTGAT TTTTCCTTGA ACAGACTGGT TCTTTTCTCG CTGTTTTTCA TCACGTTCCT GATAATGGGT TTTTTGAATC CCATCATCAA CGTTCCTCTG GACACGGCGT TTCAAAAGAT GACACCTTCT CACATCAGAG CGAGGGCCTT TTCTTTCCTC ATTCTCGTAG CAAACGGAGT CACTCCGCTC GGATCGGTTC TCTACGGATA CCTCGTTGAT AGAGTGCCGG TCCATTTTCT TTACTATATT GTCGGAGCGC TTTCTTTTCT GGTCGCTGTG CTGCTTCTGG TAGCTTTGAG GGGAAAAGAG CTTCCCACTT GA
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Protein sequence | MNELLHWKRN FFLLALGRFV SILGSSIQAV AIPLFVLDLT HSGSAVALMT VAYMVPRILF TPIAGIVGDR GDRKFLMVSM DFLRGFLICF LALLAFRNSV TLPVLYVSQI AMAVMDNLFD IPTGAMFPDI VPQDFLMRAN SIMGMVRIFP QILGPALGGV IYGFYGIAIV FLVNGVSFVL SAISEIFIVY SRKVEKKPAK FSQILEDLKE GFLFIWNHEL IRTILIFALF LNLLISPLFM VVYPYTIREV MKFSAQEFGF LETSFTLGAL LGNFLIASYL SKKNMWKAMK ISIFLFELPI VFLGFLVMPD FSLNRLVLFS LFFITFLIMG FLNPIINVPL DTAFQKMTPS HIRARAFSFL ILVANGVTPL GSVLYGYLVD RVPVHFLYYI VGALSFLVAV LLLVALRGKE LPT
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