| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TRQ2_0289 |
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| Symbol | |
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| ID | 6091693 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermotoga sp. RQ2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010483 |
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| Strand | - |
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| Start bp | 273080 |
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| End bp | 276058 |
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| Gene Length | 2979 bp |
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| Protein Length | 992 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 642487468 |
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| Product | polysaccharide export protein |
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| Protein accession | YP_001738330 |
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| Protein GI | 170288092 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1596] Periplasmic protein involved in polysaccharide export |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.593882 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAGAG CGCTGATCTT TCTGTTTCTT CTGATTGCGG TGTTTTCTCT GTCTTACACC
ATAAGAAAGG GAGACGTTCT GAGGATCGAA GTGGTGGGAT ACCCAGATCT GACGAGAAAT
TGTGCGGTGG ACATAGAAGG TGCGATCACG TTTCCGTACG TGGGACGTGT GAAGGTGGAA
GGCCTCAGCG TGGACCAGTT AACAGAGCTT TTCAAGGAAA GGCTCTCCAG GAGTTTTTCT
GAACCTGAGG TGATCGTGTC TCTTCAGCAG ATTGCTCCAA GGAACATCTA CGTCTCCGGT
GTTGTGAACA GAGTGGTGGA CATGGGAATA GAAGATCTCA GCGTTTCTGA GCTTTTCTCT
CTTCTTTCTG TGGATCTCTC CTCAGTCGAT CTTTCGAAGG TGAAGGTTTT GAGAGATGGG
AAGGTTTTTG AACTGGATCT CTCTTCGCTT CTCTGGGGTG AAGCTCCCGA GAAAGACGTG
ATGCTCCAGG AGAACGATCA GGTGATACTC CCGGAAAAGA GCTATACGGA GTTCGTGAAG
GTCGTTGGGG CCGTGGCAAA GCCGGGCATC TATCCTTACA GAAGGGAGAT GACTCTGCTC
GACGCCGTAG CGGCAGCGGG CGGTACCACG CAGGAGAGTT CGGGAAAGAT AATCGTCCTC
TCGAAAGACA AAACGGTTGA GATATCAGAG AAAGATATCT ATCAAAAGAA CCTCCTTTTG
AAACCAGGGG ACACGGTGCA CGTCCAAAAA CTCGACGAGA GGTTCGCCTA CGTTGTGGGA
GCGGTGGCAA GACCGGGAAT GTACACCTTC TCCAGAGAAG AGTCTCTCAC GCTCAAAAAT
CTCATCGCAA AAGCCGGCGG AGTCTCCGTT GATAACAGAT ACATAGAAAA GGTTCTGATC
ACAAGGAATG GAAAAACCAC GGAGTACGCA CCGGAAGTGC TGAACGAGAA CGTTCAGCTG
AATGTCGGAG ATGTCGTTGA GATAAAAAAA TACGAAGAGA CAAGAGTCTA TGTATCAGGA
TATGTGGCAA GACCAGGTGT TTACGAGATC TCCCCGAAGG AATCGGTGAC CCTGGAAAAG
CTCCTCTCGA TGGCAGGAGG GTTCAGAGGA AGTGTTGAAG AAATCGATTC GATCGTCATC
GCAAGAGGCG GAAGCGTTGT GGAGCTTTCA CCAGACAAGT TAGATTTTCT TGTGAAACCC
GGCGACATAG TGAACGTGAA GGAGTTCGTT CCAAAGAAGG CTTACATCCT CGGGTACGTG
AGAAGCCCCG GGCTTTACGC CTTTGGAAAG AGCGAAGCGT TCACGCTGAG AAACCTCATA
GCGAAGGCCG GTGGGTTCAT CGATGAAAGT CAGGTTGTCT CCGTGAAACT GTCTGGAAAG
GAATACTTCC CAGAGGAGAT AGTGGAAAAA GAGATTCCCC TCGAAGACGG AGTGTTCGTC
TACGTGGAGA AGTACACGGA CAGGTTCGTT TACATAGTGG GAGACAATGC TACAAGGAAC
GGAAGGATGA GTTTTGCTAA GGACGAACCG TTCACACTCT CGACGGCCCT GAAGAAGTAC
GGGATCGAGG ATTTCTCTCT TGTGAAGAGC CTATCACTTT TGAGAGACGG TGAAGAAAAG
AGCTTCGATC CAGAGAAGGT ATTGACGGAG GATGTTTCTC TCAAAACAGG CGACACGATC
CTCGTGAAGA CGATACAGAC GAAGAGGGTC TATTTCACCG GGGACGTGTA CGGATACGTC
GATTTTGCGA AAGACGAAGA CATCACACTT GAGAAAGCCC TCGCGAGGTT CGGAAAAATA
CAGAAGAAGT ACATAGCGGG ATTGAAGGTG CGCTCGAGCG GAAAGGTGCA GGAACTGGCG
GAAGTTACCG ATCTTTCGCT CGAAGACGGT GCGGTTGTCG AAGTGGATGT GAAAGAAGCC
GTCAGAGTCT ACGTGGACGG CTTTGTGAAG GTGCCCCAGA TGGTTGTCTT CGAGCCCGAT
GAGTCGGCTC TCTTGGACAG AGCCATTGTG AAGGCTGGAG GGTACAAAGA AGACGCTCTC
TTCGAAGCGG GCAACGTGGT CGTTCTGAGA GACGGCGGTG AGATCACCGT TTCTCAAAAC
CAGCTCAGCT TGTTCGAGCT GAAGGACGGA GACCTCGTGT ACGTGAAGTA CACCGAAAGA
CCTCACGTTT ACGTCTTCGG AGAAGGCATC ACGAACACGC TTGTGACCTT CAAAGACGAG
GAAAAACCAA CGCTCAGGAA CGTTCTGGGT AAGGTGGGCG GTGTAAAGAG CACGGGATCG
AGCAGGATCG TCGTTGTGAG TCCATCGGGT GAGAAGAAAG AAGTGTATTA TGAAGACGTG
ATCAACACAG GTGGGCCTGT TCTTGAGAGC GGAAGCGTGG TCTTCGTGCC TCTTGAGACG
GAGAACTTCG CCTACGTCGT GGGAGAGGTG GTAAGACCCG GTGCGTACGA ACTCAAAGGA
GACGTGACAC TTCTGAAGCT CATAGCACAG GCCGGCGGTC TGAGCAACTG GGCCCTGAAG
ACGAAGGTGA TCCTGAGAAG GGGAGAGAAT GAAACGACTT ACGACTTCAC GAACATAGAC
GAGGTGCAGA AGGTGAAGAT AGAGCCAGGA GACGTGGTGT ACGTACCACC CGTTGAAACG
AACTACGTGT ACGTGCTCGG TAACGTGAGG ACACCGGGTA TCGTGAAGGT GGACAGGTAC
TCGACGGTGT TCGATGTGGT GATGAGGGCC GGTGGGTTCA CAGACAGAGC CGCCACAAGC
AGGATATTCT TATTCAAGGG AGGACCTCAG GGAGAGGTCA CCGTTTGCGA TCTCTCAGGA
GTTCTTTCTG GAAAGGGTGG AGGTGTGAAT CCGAACGTCG CACCGGGTGA TGTGGTCTTC
GTTCCCGACA ACCCGCTCAT ACAGGTGACA GAGGCGCTCT CCATAGTGAA CACCGTGATA
AACACAATCA GCAACGTCAG AGACTTCATG GGGTGGTAA
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| Protein sequence | MKRALIFLFL LIAVFSLSYT IRKGDVLRIE VVGYPDLTRN CAVDIEGAIT FPYVGRVKVE
GLSVDQLTEL FKERLSRSFS EPEVIVSLQQ IAPRNIYVSG VVNRVVDMGI EDLSVSELFS
LLSVDLSSVD LSKVKVLRDG KVFELDLSSL LWGEAPEKDV MLQENDQVIL PEKSYTEFVK
VVGAVAKPGI YPYRREMTLL DAVAAAGGTT QESSGKIIVL SKDKTVEISE KDIYQKNLLL
KPGDTVHVQK LDERFAYVVG AVARPGMYTF SREESLTLKN LIAKAGGVSV DNRYIEKVLI
TRNGKTTEYA PEVLNENVQL NVGDVVEIKK YEETRVYVSG YVARPGVYEI SPKESVTLEK
LLSMAGGFRG SVEEIDSIVI ARGGSVVELS PDKLDFLVKP GDIVNVKEFV PKKAYILGYV
RSPGLYAFGK SEAFTLRNLI AKAGGFIDES QVVSVKLSGK EYFPEEIVEK EIPLEDGVFV
YVEKYTDRFV YIVGDNATRN GRMSFAKDEP FTLSTALKKY GIEDFSLVKS LSLLRDGEEK
SFDPEKVLTE DVSLKTGDTI LVKTIQTKRV YFTGDVYGYV DFAKDEDITL EKALARFGKI
QKKYIAGLKV RSSGKVQELA EVTDLSLEDG AVVEVDVKEA VRVYVDGFVK VPQMVVFEPD
ESALLDRAIV KAGGYKEDAL FEAGNVVVLR DGGEITVSQN QLSLFELKDG DLVYVKYTER
PHVYVFGEGI TNTLVTFKDE EKPTLRNVLG KVGGVKSTGS SRIVVVSPSG EKKEVYYEDV
INTGGPVLES GSVVFVPLET ENFAYVVGEV VRPGAYELKG DVTLLKLIAQ AGGLSNWALK
TKVILRRGEN ETTYDFTNID EVQKVKIEPG DVVYVPPVET NYVYVLGNVR TPGIVKVDRY
STVFDVVMRA GGFTDRAATS RIFLFKGGPQ GEVTVCDLSG VLSGKGGGVN PNVAPGDVVF
VPDNPLIQVT EALSIVNTVI NTISNVRDFM GW
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