Gene EcolC_3725 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagEcolC_3725 
Symbol 
ID6064413 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameEscherichia coli ATCC 8739 
KingdomBacteria 
Replicon accessionNC_010468 
Strand
Start bp4078309 
End bp4079535 
Gene Length1227 bp 
Protein Length408 aa 
Translation table11 
GC content55% 
IMG OID641603142 
Productmajor facilitator transporter 
Protein accessionYP_001726662 
Protein GI170021708 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCACGTT TTTTTGCCCG CCATGCCGCC ACGCTGTTTT TCCCGATGGC GTTGATTTTG 
TATGACTTTG CCGCGTACCT GTCGACGGAT CTGATCCAGC CGGGGATCAT TAATGTGGTC
CGTGATTTTA ATGCCGATGT CAGTCTGGCC CCGGCTGCCG TCAGTCTCTA TCTCGCTGGC
GGTATGGCGT TACAGTGGCT GCTGGGGCCG CTTTCCGACA GGATTGGCCG CAGGCCGGTG
CTGATTACCG GGGCGCTTAT TTTTACCCTT GCCTGCGCCG CGACAATGTT CACAACGTCT
ATGACACAGT TTCTTATCGC GCGTGCAATT CAGGGTACCA GTATCTGTTT TATTGCTACC
GTTGGTTATG TCACGGTGCA GGAAGCCTTT GGGCAGACGA AAGCCATTAA ACTGATGGCG
ATTATTACCT CCATTGTGTT GCTGGCCCCC ATAATCGGCC CTCTTTCCGG CGCGGCGTTA
ATGCACTTTG TCCACTGGAA AGTGCTTTTT GCCATTATTG CGGCGATGGG GCTTGTCTCG
TTTGTCGGCC TGTTGTTGGC GATGCCAGAA ACGGTGAAGC GTGGTGCGGT TCCGTTCAGC
GCTGTTAGCG TACTGCGCGA TTTTCGTAAC GTTTTTTGCA ACCGGCTGTT CCTCTTTGGC
GCGGCAACCA TCGCCCTCAG CTACATCCCC ATGATGAGTT GGGTTGCGGT GTCACCGGTT
ATCCTGATCG ACGCGGGCGG CTTAACGACT TCGCAATTTG CCTGGACACA GGTTCCGGTC
TTCGGCGCGG TGATTGTCGC CAACACCATC GTGGCGCGAT TTATCAAAGA TCCGACCGAA
CCGCGGTTTA TCTGGCGTGC CGTGCCCATT CAACTGGTCG GCCTCGCGCT ATTGATTGTC
GGTAATCTGC TGTCGCCGCA CGTCTGGCTG TGGTCGGTGC TTGGTACCAG CCTGTACGCT
TTTGGTATTG GTTTGATTTT CCCGTCGCTA TACCGCTTTA CGCTGTTTTC GAACAACCTG
CCGAAGGGCA CCGTGTCGGC ATCGCTGAAT ATCGTGGTTT TAACGGTGAT GTCGGTCTCG
GTCGAAATTG GTCGCTGGCT GTGGTTTAAC GGCGGTCGTT TGCCGTTTCA TCTGCTGGCG
GTAGTTGCGG GGCTGTTTGT TGTGTTAACG CTGGCGGGGT TACTGAAACG CGTGCAGTTG
CATCAGGCAA GCGAACTGGC GGTATAG
 
Protein sequence
MPRFFARHAA TLFFPMALIL YDFAAYLSTD LIQPGIINVV RDFNADVSLA PAAVSLYLAG 
GMALQWLLGP LSDRIGRRPV LITGALIFTL ACAATMFTTS MTQFLIARAI QGTSICFIAT
VGYVTVQEAF GQTKAIKLMA IITSIVLLAP IIGPLSGAAL MHFVHWKVLF AIIAAMGLVS
FVGLLLAMPE TVKRGAVPFS AVSVLRDFRN VFCNRLFLFG AATIALSYIP MMSWVAVSPV
ILIDAGGLTT SQFAWTQVPV FGAVIVANTI VARFIKDPTE PRFIWRAVPI QLVGLALLIV
GNLLSPHVWL WSVLGTSLYA FGIGLIFPSL YRFTLFSNNL PKGTVSASLN IVVLTVMSVS
VEIGRWLWFN GGRLPFHLLA VVAGLFVVLT LAGLLKRVQL HQASELAV