| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | EcolC_2008 |
|---|
| Symbol | |
|---|
| ID | 6068075 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Escherichia coli ATCC 8739 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010468 |
|---|
| Strand | - |
|---|
| Start bp | 2214546 |
|---|
| End bp | 2215718 |
|---|
| Gene Length | 1173 bp |
|---|
| Protein Length | 390 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 641601422 |
|---|
| Product | aminotransferase class I and II |
|---|
| Protein accession | YP_001724981 |
|---|
| Protein GI | 170020027 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1168] Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.00273969 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.938908 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTCGATT TTTCAAAGGT CGTGGATCGT CATGGCACAT GGTGTACACA GTGGGATTAT
GTCGCTGACC GTTTCGGCAC TGCTGACCTG TTACCGTTCA CGATTTCAGA CATGGATTTT
GCCACTGCCC CCTGCATTAT CGAGGCGCTG AATCAGCGCC TGATGCACGG CGTATTTGGC
TACAGCCGCT GGAAAAACGA TGAGTTTCTC GCGGCTATTG CCCACTGGTT TTCCACCCAG
CATTACACCG CCATCGATTC TCAGACGGTG GTGTATGGCC CTTCTGTCAT CTATATGGTT
TCAGAACTGA TTCGTCAGTG GTCTGAAACA GGTGAAGGCG TGGTGATCCA CACACCCGCC
TATGACGCAT TTTACAAGGC CATTGAAGGT AACCAGCGCA CAGTAATGCC CGTTGCTTTA
GAGAAGCAGG CTGATGGTTG GTTTTGCGAT ATGGGCAAGT TGGAAGCCGT GTTGGCGAAA
CCAGAATGTA AAATTATGCT CCTGTGTAGC CCACAGAATC CTACCGGGAA AGTGTGGACG
TGCGATGAGC TGGAGATCAT GGCTGACCTG TGCGAGCGTC ATGGTGTGCG GGTTATTTCC
GATGAAATCC ATATGGATAT GGTTTGGGGC GAGCAGCCGC ATATTCCCTG GAGTAATGTG
GCTCGCGGAG ACTGGGCGTT GCTAACGTCG GGCTCGAAAA GTTTCAATAT TCCCGCCCTG
ACCGGTGCTT ACGGGATTAT AGAAAATAGC AGTAGCCGCG ATGCCTATTT ATCGGCACTG
AAAGGCCGTG ATGGGCTTTC TTCCCCTTCG GTACTGGCGT TAACTGCCCA TATCGCCGCC
TATCAGCAAG GCGCGCCGTG GCTGGATGCC TTACGCATCT ATCTGAAAGA TAACCTGACG
TATATCGCAG ATAAAATGAA CGCCGCGTTT CCTGAACTCA ACTGGCAGAT CCCACAATCC
ACTTATCTGG CATGGCTTGA TTTACGTCCG TTGAATATTG ACGACAACGC GTTGCAAAAA
GCACTTATCG AACAAGAAAA AGTCGCGATC ATGCCGGGGT ATACCTACGG TGAAGAAGGT
CGTGGTTTTG TCCGTCTCAA TGCCGGCTGC CCACGTTCGA AACTGGAAAA AGGTGTGGCT
GGATTAATTA ACGCCATCCG CGCTGTTCGT TAA
|
|---|
| Protein sequence | MFDFSKVVDR HGTWCTQWDY VADRFGTADL LPFTISDMDF ATAPCIIEAL NQRLMHGVFG
YSRWKNDEFL AAIAHWFSTQ HYTAIDSQTV VYGPSVIYMV SELIRQWSET GEGVVIHTPA
YDAFYKAIEG NQRTVMPVAL EKQADGWFCD MGKLEAVLAK PECKIMLLCS PQNPTGKVWT
CDELEIMADL CERHGVRVIS DEIHMDMVWG EQPHIPWSNV ARGDWALLTS GSKSFNIPAL
TGAYGIIENS SSRDAYLSAL KGRDGLSSPS VLALTAHIAA YQQGAPWLDA LRIYLKDNLT
YIADKMNAAF PELNWQIPQS TYLAWLDLRP LNIDDNALQK ALIEQEKVAI MPGYTYGEEG
RGFVRLNAGC PRSKLEKGVA GLINAIRAVR
|
|---|
| |