Gene YPK_3282 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_3282 
SymbolaroL 
ID6090619 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp3592914 
End bp3593438 
Gene Length525 bp 
Protein Length174 aa 
Translation table11 
GC content49% 
IMG OID641598359 
Productshikimate kinase II 
Protein accessionYP_001722004 
Protein GI170025499 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0703] Shikimate kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.970543 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACACAAA CTATCTTCAT GGTAGGCGCG CGCGGTGCGG GTAAGACCAC TATTGGGAAG 
GCATTGGCGC AGGCATTGGG GTATCGGTTT GTTGATACAG ATCTATTTAT GCAACAAACC
TCACAAATGA CCGTGGCTGA AGTTGTTGAG AGTGAAGGTT GGGATGGTTT TCGTCTACGT
GAAAGCATGG CACTACAGGC AGTAACGGCA CCTAAAACAG TCATTGCCAC TGGTGGTGGT
GCGGTACTGT CCAGTGAAAA CCGTGCATTC ATGCGTGATC ATGGGCGAGT TATTTATCTG
CGGGCATCAG CAGCCGTATT GGCAAAGCGG CTAGCAGAAG ATCCTGAAGA GGCTCAGCGG
CCAAGTTTAA CCGGTAAACC CATCGTTGAA GAAATGCTGG ATGTGTTGGC TAGCCGTGAA
GCATTGTATC AGGACGTCGC CCATCATGTA CTTGATGGAA CGCAAACTCC GTCGCTGGTT
GTCGAACAAA TTTTACAGAT GTTGACTGGT GAGATGGTCA AATAA
 
Protein sequence
MTQTIFMVGA RGAGKTTIGK ALAQALGYRF VDTDLFMQQT SQMTVAEVVE SEGWDGFRLR 
ESMALQAVTA PKTVIATGGG AVLSSENRAF MRDHGRVIYL RASAAVLAKR LAEDPEEAQR
PSLTGKPIVE EMLDVLASRE ALYQDVAHHV LDGTQTPSLV VEQILQMLTG EMVK