| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_2156 |
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| Symbol | |
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| ID | 6087846 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis YPIII |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010465 |
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| Strand | - |
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| Start bp | 2388368 |
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| End bp | 2393263 |
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| Gene Length | 4896 bp |
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| Protein Length | 1631 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 641597224 |
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| Product | filamentous haemagglutinin domain-containing protein |
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| Protein accession | YP_001720895 |
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| Protein GI | 170024390 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3210] Large exoproteins involved in heme utilization or adhesion |
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| TIGRFAM ID | [TIGR01901] filamentous haemagglutinin family N-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.435206 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAATAA ATAAATTTAA ACTTTCCCCA GCAGGAAAGT TGACGGTTAT CTTATCTTTA
ATTCTTACTC CAATCACAAA TAGCTATTCT GCTGAAATAG AAGCAGCGGG AAATACGTAC
ATGAGGGGTA ATGAACATAT CCCAAGTGTT TATAATAATC CTGATGGTGT GAGTGTGATA
AATATCGCTC CTCCGTCAGA GCATGGTCTC TCGCATAATC AATATATGGA ATTTCATGTT
AATGAACATG GGGTCGTGTT TAATAATTCA CTTGAGAGAG TTGTAAAAAA TGGAGTGACT
TATGATGCTA ACCTTAATTT ACGTGGCTCA CCAGCACGTG TGATATTAAA TGAAGTGGTG
GGGCTAAATG CTTCAGTATT GGCTGGGCAC CAGGATATCG TAGGCATACC TGCAGACTAT
ATTCTGGCAA ATGCTAACGG TATTAGCTGT CAGGGATGTA GTTTTGCGCC AGAGTTTAAA
AATGTCACGT TAGCCGTAGG GAAAGTCGTT ACGGTTCGTG GTGATCTACG CAGTATAGAT
ACCATAGGGA ATGCTAATTT ATTGAATGTG TCAAATGATC GCGATGATAA TAATATGGCT
GATGCATTGA CACTAATTGC GCCAGTTATT AGCACTAATG GCCACATTAA AGTCAAAGAC
GATGCGGATT TTGTTGTGGG CCAAAATATG TACCATTTTA TGAAAGATAA AACTCCAGAG
GTAGAAGCAG GTAATAGTAA AATAAAAACA ATTGATGGCT ACTATCTTGG CAGTATTTCC
GCTAACCGTA TTAATTTAGT TGACACAAGG GAAGATAATA ACATTAATTT ATTTGGTGAT
GTGGCCGCAG AGGAAACCAA GGTGGTCACC TCTGGCACGT TGCGATTAAT AGCGGCAGAA
GACGGCAGGC AGGATATAAC CATAAAAAAT GGAATGAATA TATCGGCGAA CAAGATTGAT
ACTACACGGG AATTTACTGC TGATGAAGTG AAGTTATTTG ACATAAAAGA AAATAAAGTC
AACAAAACCA TTATTAATGC TGGCCGTATT GATTTTGTTG CTGTCGAAGA TGTTAAATTG
GCAGGTACTA CAATTTTAAG TAATGATGAT CTCTCAATTA CGGCAAAGAG TTTGCATGTT
GACTCACATT TAATTAAACA TTCAAAGAGC ACAGGCGAGG TGGTTACTCA TGTGAGTATT
ATTGATGAAC CAACTAAGAA AGTAGAAAAT GAATATAATG ATCATGTCTC ACAAGCCAGT
GCAATTATGA GTCGGAAGAA CGTTAAATTA CATGGGCAGG ATGGTTTAGA ACTGAAAAAT
GCCAATATCC AAGCCTATGG GGATATTAAA TTGTCTTCTG AAGGTGATAT TCATTTAAAT
GGTTCAACTG AAACCAATAC TAGAATAAAT AATATAACCT ACATTAATCA TGATAATGAT
TTTAAAAAAG GTCATGATAA TGTAAAAACT GTCACTGAAA GGTTTGCCCC TCTTGATATG
AAGGCGAGGG GGAATATTAA TATACAGAGC AAAAACACGC ATATCCATGG TGCCAAAATA
GCCTCAGAGG GTGAGTTATC AATAGATGCC AAGGGTGACG TCTATATTGG GGTGGCAAGT
ATGTTAACTT CAGAGTTTAA AGATATTGAC TACAATCAGT GGGGGGGGGC TCATGGTTCG
GAAAAAGACA AGATAGAAGA GTATGTTTAT ACCGGTAATA AGTCAGATTT AGTCGGAGGG
CGGGTAAAAA TCACTGCGGG TAATGATGCC AGAATATTTG GTGGAAAAAT AAATGGAGTA
GATGGTGGAG AGATCTCGGC TCAAAATTAT CTGAGCATTG ATGGTGTGCT GGGGACACGC
AGCTTTAAAA GGGATCAAAA AACTGGCGGT ATTATGCATA CCACCAAGAA TACTTCTACT
GCCGACAATC ACTATGAAAA ATTTATCGAC AGCGAAATTA GTTCTGATGG CGATTTCCGC
ATATTCAGTC AAAAAGACCT TTATATTGAT GGTAGTCGAA TTAATGTAAA CGGAAAGCTA
GATATTAATG CTAATGAGAA GTTGACCGTA CAGGCTGCTC GTCAGCAACA AAAAATAGAT
GAGGAAAAAA CCCGCCTCAG CATAGAGTGG TTTGCTAAAG AAAGCAGTGA TAAGCAGTAT
CGTGCGGGCT TTCTCATTAA TCATCAAAAA GACACTGAAA ATACACTGAG AGATGAACAC
CAAATTGCAA CATTGAGTGC AGAACAGATT AATCTCACTG CCGGAGATGA TATTAAATTC
TTTGGCACTG GCATCAGTAC CTCTAAGGGT GACGTGATAA TAAAAACACC TAAAAATGTT
GGATTTTTCA CCGCGAAAAA CCGTGCACTA ATCAATAAAA ATCAGGTTAA TAATAGTGGG
GGTTTTTATT TCACGTCAGG GATGGATAAA ACAGGTAATG GCTTACAATA TACCCATATT
GATAAAGAAA GTTACAGTGA CATTGAGAAT AATCTGGTCG TTAAAACGCA TATTAAGGGT
GATTTAAATA TTAATGCAGG AGGCGATCTT AATCAGCAAG GGACGCAGCA TGATGTGGCT
AAAAACTATT CAGTTGAAGC CTCGAATATT AATAATATGG CGAGCAATAA TCTTGCTTTC
TCCAAAACAG ATACATTACA GGTTGATGTC AGCATCGGTA ATAATATTGA TCACAGCGGG
ATGACCCGTC CAATAGAAAA AGTCATTAAA GATCCGGCTA ATACGCTTGA TTATATCGGT
GGCAGAGGAA GCCAGAAAGG TGTTTCAGAC CCAACGATTG GTCTGGATGT GGATGTATCA
GGCAGTCGAA CCAAAACGTC AGACAATGAC GCGTTAGCGT TGGTTACCTC GATTAAAGCC
CAAGACATTA AGCAGGTGGC GAAAAAAGAT GTGCTGGATG AAGGGACCCA ATATCACGCT
ACCGAGGGCG GTATGAGTTT ACAGGGGGCA CGTCATTTCA GCCGTGCTGC AGTAAACAGT
AAAGCAAATA CAACCGAGAA AGAAAAAGGT GAAGTAAGTC TTCGGGGGGG CATGACGGCC
ACTCAGGAGA TAAAAGGCCA TCTGGGGGTT AAGGTGGAGA CCAGCCAGGG GGACAGCTAT
GCTGAAGAGA TGTTGGTCGG GAATATTAAT GCCAAGTCGG GAGTTTCTAT CAAAACGACC
GGGGATGCCT ATTATTATGC GACTAATATT GAGGGAGGAA ATGGGGATGT CACCATTGAT
GCGGGCAATA ATCTTTATTT TGACCAGGTA CAGGATAGCC AACGCAGCAG TAATATAAAA
TTTTCGGGTA ATGGAAAACT GAGTCTCGGT GGCTCTTCTG GCAGCAAGGA GTTTCGCCTT
GAAGGGGGCG GGGGCTACCA ACAAGGTCGA AGCCAGCGCA CTGACGCTAT TGTAAGTAAA
ATCAATACAC AGGGTAATGT AACGCTCAAA GCGGGCGCGG ATCTTACTAC AAAAGGTATG
CAGATCGGCA AGCAAGGAAC CCGGGCAAGC GATGTCTCTT TGTTGGCGGC TGGAGAGGTC
AAACTGTTGG CCGCGGTGTC TGGCAGTGCC GATATTAATG ATGGTGCGCT GGCCGACTTC
CGTCTGGGGG GGAAACGAGC AACAGGCGGT GCTTCAAAAG AAGGTTTTGT GGGAGCAGGC
GTTCAGGCTG ATAAAGTCAA TCAATCGGTT TCTGACCGTC AGGGCGGCCA TATTTATAGT
AAGAATACGG TGTCTATAAA ATCAGACAGT GACAGCAATC AAGCCATCCA TTTAGAAGGG
TTAAAAATTG ATGCACCAAA AGTCGATTTG AGTGCGCAAC AGGGTGGGGT ATTTATCGAG
TCTGCATTAA GTGAATTGCC AAAGGATAAT TGGAATTTTG GGTTTAACCT GGATATGGTC
CTGAAAAACA CATCGCCTAA AAAAGAAGAT GGAACAATTG ACAAGGATAA AGCCAGTGAA
AGTTATTATA AAGGTGCTGG CATTAAAGTA ATGGTGGATA AACAAGATAT GTTTAAACAT
CAGAATGCGC ATATCAACAC TGCATATTTT TCTTTGAATA CCAAAAAAGA TGCAGTAATG
AAAGGGGCGC GAATTGAGAG CACGCGGGCT GATGTTAACG TGGGCCGGGA CCTGACGATC
GAAAGCCTCA AGAGTAGGGA AGACAGTGTC AAGGTGGATG TTGAGTTATC GCTAAGCCAT
ACCAATGATA AAAGCAGTAG CGTTACATCT AAACTCTCGA AGCTCACGAC CAAGAAGTTC
GAGAAACAGA CTCAAGAAAA GTTAGACTCA GGTATTAAAG ATATTGGGTT AATGTATAAC
AATAAAGTAA AACCAAAAGA TACGATGGGC GGGGTTGGTT TCAGTAAAGA ATCTCAAGGA
GTATATCTTC CAACATTATC TTCTGAGACA AAATCCCGTA ATTTTGGTGA TAAAACGGCA
CGCTATCTGG GCGGTCAATT GAAGGGGATC GCCAGCGGCC CAGAAGGCCT TGATGGGCGT
GCGAAGTTGG ATGTACAAAT AGTAAACAAT GATGCGGTTG CTGAACAATC CGGTATTTTC
GGTATTGATG AGACGAATAT TTCGGTAAAA GGGACCACCA AACTACACGG CGCGGAAATA
AGTAGTGGAT CAGGGCAGCT CACCTTGGAA ACAGAGAACA GGGAACTGAG CAATATAAAA
AATAGTACTC ACAAGGGGGG CGGTGGGTTT AATGTTTCTC CTAGTGTATT AGGGAATTTA
ACTGGGGCTG GTAAAGATGT CTCTGAGGGG AAAACCCCCT TTATTCATCA CCCTCACAAT
AGTTCAGATG AGAGTGAGTC TGTTGGTAAA ATCAAGGGTG AAAAAGCCAC TGGCCTTGCT
TTTGATGAAC TCCCTTTTAG CCCAAAACCT CGCTAA
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| Protein sequence | MKINKFKLSP AGKLTVILSL ILTPITNSYS AEIEAAGNTY MRGNEHIPSV YNNPDGVSVI
NIAPPSEHGL SHNQYMEFHV NEHGVVFNNS LERVVKNGVT YDANLNLRGS PARVILNEVV
GLNASVLAGH QDIVGIPADY ILANANGISC QGCSFAPEFK NVTLAVGKVV TVRGDLRSID
TIGNANLLNV SNDRDDNNMA DALTLIAPVI STNGHIKVKD DADFVVGQNM YHFMKDKTPE
VEAGNSKIKT IDGYYLGSIS ANRINLVDTR EDNNINLFGD VAAEETKVVT SGTLRLIAAE
DGRQDITIKN GMNISANKID TTREFTADEV KLFDIKENKV NKTIINAGRI DFVAVEDVKL
AGTTILSNDD LSITAKSLHV DSHLIKHSKS TGEVVTHVSI IDEPTKKVEN EYNDHVSQAS
AIMSRKNVKL HGQDGLELKN ANIQAYGDIK LSSEGDIHLN GSTETNTRIN NITYINHDND
FKKGHDNVKT VTERFAPLDM KARGNINIQS KNTHIHGAKI ASEGELSIDA KGDVYIGVAS
MLTSEFKDID YNQWGGAHGS EKDKIEEYVY TGNKSDLVGG RVKITAGNDA RIFGGKINGV
DGGEISAQNY LSIDGVLGTR SFKRDQKTGG IMHTTKNTST ADNHYEKFID SEISSDGDFR
IFSQKDLYID GSRINVNGKL DINANEKLTV QAARQQQKID EEKTRLSIEW FAKESSDKQY
RAGFLINHQK DTENTLRDEH QIATLSAEQI NLTAGDDIKF FGTGISTSKG DVIIKTPKNV
GFFTAKNRAL INKNQVNNSG GFYFTSGMDK TGNGLQYTHI DKESYSDIEN NLVVKTHIKG
DLNINAGGDL NQQGTQHDVA KNYSVEASNI NNMASNNLAF SKTDTLQVDV SIGNNIDHSG
MTRPIEKVIK DPANTLDYIG GRGSQKGVSD PTIGLDVDVS GSRTKTSDND ALALVTSIKA
QDIKQVAKKD VLDEGTQYHA TEGGMSLQGA RHFSRAAVNS KANTTEKEKG EVSLRGGMTA
TQEIKGHLGV KVETSQGDSY AEEMLVGNIN AKSGVSIKTT GDAYYYATNI EGGNGDVTID
AGNNLYFDQV QDSQRSSNIK FSGNGKLSLG GSSGSKEFRL EGGGGYQQGR SQRTDAIVSK
INTQGNVTLK AGADLTTKGM QIGKQGTRAS DVSLLAAGEV KLLAAVSGSA DINDGALADF
RLGGKRATGG ASKEGFVGAG VQADKVNQSV SDRQGGHIYS KNTVSIKSDS DSNQAIHLEG
LKIDAPKVDL SAQQGGVFIE SALSELPKDN WNFGFNLDMV LKNTSPKKED GTIDKDKASE
SYYKGAGIKV MVDKQDMFKH QNAHINTAYF SLNTKKDAVM KGARIESTRA DVNVGRDLTI
ESLKSREDSV KVDVELSLSH TNDKSSSVTS KLSKLTTKKF EKQTQEKLDS GIKDIGLMYN
NKVKPKDTMG GVGFSKESQG VYLPTLSSET KSRNFGDKTA RYLGGQLKGI ASGPEGLDGR
AKLDVQIVNN DAVAEQSGIF GIDETNISVK GTTKLHGAEI SSGSGQLTLE TENRELSNIK
NSTHKGGGGF NVSPSVLGNL TGAGKDVSEG KTPFIHHPHN SSDESESVGK IKGEKATGLA
FDELPFSPKP R
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