| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_1549 |
|---|
| Symbol | |
|---|
| ID | 6090831 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pseudotuberculosis YPIII |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010465 |
|---|
| Strand | + |
|---|
| Start bp | 1710060 |
|---|
| End bp | 1711094 |
|---|
| Gene Length | 1035 bp |
|---|
| Protein Length | 344 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 641596619 |
|---|
| Product | LacI family transcription regulator |
|---|
| Protein accession | YP_001720295 |
|---|
| Protein GI | 170023790 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1609] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAAAAAA TACGCAAGCG CCGTAATACC GGGCGGGTCA CGCTACAGGA AGTAGCCGAT
TATGCTGGGG TAGGCTCGAT GACTGTTTCC CGAGCGCTAC GAACGCCGGA ACAGGTCTCA
GATAAGTTAC GTGAGAAAAT AGAGCAAGCG GTTGAAAAAT TAGGCTACAT TCCAAACCGT
GCCGCCGGTG CTTTAGCGTC AGGGCACAGC GATACCGTGG CGGTGTTGAT TCCGTCTTTA
ACCGATAAAG CCAGCTCTCG GTTTATGCAG GCACTACAGC AAATTCTCAA TAAAAATGAA
TTTCAGTTAT TGCTGGGTTG CCATGAATAC AATCAACGTA AAGAAGCTGA GATTCTCATG
ACGTTACTGC AAAGCCACCC GGCGGCAGTG GTGATATTTG GCTCGCAGTT GGCGGATAAG
ACATATCAGA TTCTTGAGCG CACCAATATT CCTATCGTTA ATGTTGTCGG CTCCTATTTT
AAAGGGGCTA AAATTACCCT TGAAGCGGCT TTCTTTGAAT CGGCTTATGA ATTAACCCGT
CACTTACTGG AGCGTGGCTA TCAACATATT GGCTATCTGG GGGCGCATCG GGATAATCAG
TTGCAACGCC AGCAGCTCAA TGGATGGCAT AAGTCGATGC TCGAGCATTA CAAAAATGCT
GACCAAACGG TCACCACGCC CGATGCGGCC AGCTTACAAT TTGGCCGTTA TGCCTTGACG
GAGATCTTAC TGCGCCAGCC TGAATTAGAT GCAGTGATAT GCAGCCACGA AGATATTGCA
CTTGGTGTGC TGTTTGAATG CCAGCGGCGG CTGCTTAAAA TCCCTAGCGG CATTGCGGTT
GCTTGCCTGG ATGGCTCAGA GAGCTGTGAT CAAACTCATC CAACGCTGAC CTCAATGCGT
ATCGATTATA AAAAAATGGG GAAAGAGGCC GGTAAGATGC TGATTGATAT GCTCAATGAG
GATGATGCCG GAGTGAAAAG TGTGCCCCTC AGCCAAAGTT TTAACTATAA ATTTGAACCA
CGGCAAAGTA CCTAA
|
|---|
| Protein sequence | MEKIRKRRNT GRVTLQEVAD YAGVGSMTVS RALRTPEQVS DKLREKIEQA VEKLGYIPNR
AAGALASGHS DTVAVLIPSL TDKASSRFMQ ALQQILNKNE FQLLLGCHEY NQRKEAEILM
TLLQSHPAAV VIFGSQLADK TYQILERTNI PIVNVVGSYF KGAKITLEAA FFESAYELTR
HLLERGYQHI GYLGAHRDNQ LQRQQLNGWH KSMLEHYKNA DQTVTTPDAA SLQFGRYALT
EILLRQPELD AVICSHEDIA LGVLFECQRR LLKIPSGIAV ACLDGSESCD QTHPTLTSMR
IDYKKMGKEA GKMLIDMLNE DDAGVKSVPL SQSFNYKFEP RQST
|
|---|
| |