Gene YPK_1524 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_1524 
Symbol 
ID6087680 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp1687449 
End bp1688366 
Gene Length918 bp 
Protein Length305 aa 
Translation table11 
GC content50% 
IMG OID641596594 
Producthypothetical protein 
Protein accessionYP_001720270 
Protein GI170023765 
COG category[E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism
[R] General function prediction only 
COG ID[COG0697] Permeases of the drug/metabolite transporter (DMT) superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATGTTT TATTTCCATT GTTTGCGGTG ATTATTTGGT CAGTCAATGC CGTGGTGAGT 
AAAATCTCCG CCACCGCCAT TGATCCGGCA GCAATCTCCT TCTACCGCTG GTTACTGGCC
CTGCTGACAT TATCCCCATT TCTGCTGCTC GGTGTGGTCC GCAATTGGCA GGCGATACGT
GTCTATTGGT GGAAATTAAT GCTACTGGGG ATGCTGGGCA TGGTGCTGTA CCAAAGCCTG
GCTTACTATG CCGCCCACAG TGTCAGCGCA CTGTTTATGG GGATCCTCAG TTCATTAATT
CCGCTGTTGA CGGTGCTTAT CAGTATTGTA TTGTTACGCG TGGCACCAAC CGTTGGGATT
GCTCTGGGTA GCCTGCTGTC CTTAGGGGGA TTAGTTTGGT TGATCAGTGC GGGCAACCCA
GCTCAACTGC TGCAACATGG GATCGGTAAA GGCGAATTAA TGATGCTTGG CGCGTCAGCC
TCTTATGCGC TGTATGGGGT ATTAACAAAG CGCTGGGCCA TTCAACTACC GAATTGGCAA
TCCCTTTATA TGCAAATCGT TTTTGGTGTC GTGCTGCTGT TACCTGGCTT CCTGATGACC
CCAGACGTGC AGCTAACGGC ACAGAATATT CCTTTGGTTC TCTTTGCTGG TATTCCAGCC
TCAATTCTTG CGCCTTATTT ATGGATTCAA GGCGTGATGC GACTGGGTGC CAATACCGCT
TCTATCTTTA TGAATCTGAC ACCCGTATTT ACTGCCATTA TTGCCGTCGT CTTCTTGCAT
GAGCAGTTGC ACAGTTATCA CTTGATTGGT GGCGGCATTA CCCTTGCCGG AGTGGTGCTG
GCCCAACGTC TGCGCAGCCC ATTGCGGCGC AATTTAGATC TTGCTGGACA TATCCCAAAC
AACAAAAACA GTAGATAG
 
Protein sequence
MNVLFPLFAV IIWSVNAVVS KISATAIDPA AISFYRWLLA LLTLSPFLLL GVVRNWQAIR 
VYWWKLMLLG MLGMVLYQSL AYYAAHSVSA LFMGILSSLI PLLTVLISIV LLRVAPTVGI
ALGSLLSLGG LVWLISAGNP AQLLQHGIGK GELMMLGASA SYALYGVLTK RWAIQLPNWQ
SLYMQIVFGV VLLLPGFLMT PDVQLTAQNI PLVLFAGIPA SILAPYLWIQ GVMRLGANTA
SIFMNLTPVF TAIIAVVFLH EQLHSYHLIG GGITLAGVVL AQRLRSPLRR NLDLAGHIPN
NKNSR