Gene YPK_0035 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_0035 
Symbol 
ID6088623 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand- 
Start bp38131 
End bp38754 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content52% 
IMG OID641595094 
Productsuperoxide dismutase 
Protein accessionYP_001718802 
Protein GI170022297 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0605] Superoxide dismutase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTTATT CACTGCCATC ACTGCCTTAT GCTTATGATG CCTTAGAACC ACACTTCGAT 
AAGCAGACGA TGGAAATCCA TCACACCAAA CACCATCAGA CCTATGTTAA CAATGCAAAT 
ACGGTGTTGG AGAGCTTCCC GGAGCTGGCG GACCTGAGCG TTGAAGATCT GATCAAAGAT 
CTGGATAAAG TCCCTGCTGA AAAGCGCACC TTTATGCGTA ACAACGCAGG CGGCCACGCT 
AACCACAGTC TGTTCTGGAA AGGCCTGAAA CTGGGCACCA CCCTAGCCGG TGACCTGAAA 
GCCGCTATCG AGCGCGATTT CGGCAGCGTA GACAGCTTCA AAGAAAAATT TGAACAAGCT 
GCTGCGACCC GTTTCGGTTC TGGCTGGGCT TGGCTGGTAC TGAAAGACGA CGGCAAACTG 
GCGGTTGTTT CAACCGCTAA CCAAGACAGC CCGCTGATGG GCGAAGCCGT TTCTGGCGTA 
TCAGGTTTCC CGATTGTGGG CCTGGACGTA TGGGAACACG CTTACTACCT GAAATTCCAA 
AACCGCCGCC CAGACTACAT CAAAGCCTTC TGGAACGTGG TTAACTGGGA TGAAGCTGCA 
GCGCGTTTCG CTCAAGCCAA GTAA
 
Protein sequence
MSYSLPSLPY AYDALEPHFD KQTMEIHHTK HHQTYVNNAN TVLESFPELA DLSVEDLIKD 
LDKVPAEKRT FMRNNAGGHA NHSLFWKGLK LGTTLAGDLK AAIERDFGSV DSFKEKFEQA 
AATRFGSGWA WLVLKDDGKL AVVSTANQDS PLMGEAVSGV SGFPIVGLDV WEHAYYLKFQ 
NRRPDYIKAF WNVVNWDEAA ARFAQAK