| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daud_1705 |
|---|
| Symbol | |
|---|
| ID | 6027029 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Desulforudis audaxviator MP104C |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010424 |
|---|
| Strand | - |
|---|
| Start bp | 1796986 |
|---|
| End bp | 1797507 |
|---|
| Gene Length | 522 bp |
|---|
| Protein Length | 173 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 641594525 |
|---|
| Product | NusG antitermination factor |
|---|
| Protein accession | YP_001717836 |
|---|
| Protein GI | 169831854 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0250] Transcription antiterminator |
|---|
| TIGRFAM ID | [TIGR01955] transcriptional activator RfaH |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.0707648 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCGTTGC AGTGGTGCGC CGTTAACACC AAACCCAAGA AAGAGGATTT CGCCGCCCGG
CAGCTGGAGG CCAAGGGTCT GGAGGTTTTT TTGCCCCGGA TCTCGGTCAC CCGCAAGCGG
GGCGCGTCCA AGTTCAGCCT GTGGGAACCC CTGTTTCCGG GGTATCTCTT TGTGAAGTTG
CTCCCGGAAC CGGTTCAGGT CCAGCGGGTG AACTGGACGC CGGGGGTCAG GCGCCTGCTT
TGCGCCGGGG ACACCCCGGT GCCGGTGCCC GACGAGGCCA TTGCCCTCAT CCGCCAGCGG
GTCGGCCCCG GGGGCCGCCT GACGCCCAAG CCGCAAGCGG AGTTTCCGGC CGGCAGCCGG
GTGGCCGTGC GTCACGGCCC GTTCGCCGGC CTTCTGGGCG TGGTGGAAAA GCCCATGTCC
GGGCGGGGCC GGGTACGGGT GCTGCTGGAG CTCCTGCAGC GCCAGACGGC GGTTGAGATT
GACGCCGTCG ACCTGGACCG GCTGGGCTGG GCGGGCGCCT AG
|
|---|
| Protein sequence | MALQWCAVNT KPKKEDFAAR QLEAKGLEVF LPRISVTRKR GASKFSLWEP LFPGYLFVKL
LPEPVQVQRV NWTPGVRRLL CAGDTPVPVP DEAIALIRQR VGPGGRLTPK PQAEFPAGSR
VAVRHGPFAG LLGVVEKPMS GRGRVRVLLE LLQRQTAVEI DAVDLDRLGW AGA
|
|---|
| |