Gene Daud_1214 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaud_1214 
Symbol 
ID6026483 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Desulforudis audaxviator MP104C 
KingdomBacteria 
Replicon accessionNC_010424 
Strand
Start bp1272386 
End bp1273210 
Gene Length825 bp 
Protein Length274 aa 
Translation table11 
GC content67% 
IMG OID641594029 
ProductABC transporter related 
Protein accessionYP_001717357 
Protein GI169831375 
COG category[H] Coenzyme transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG1120] ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.719028 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGGCTTC AGGTTAAGGG GGTCTCCTTC GCCTACGGGA GTGCTCCGGT TCTGGATAAC 
GTCGCGTTTA GGGTGCGGGC CGGGGAGACA CTGGGGGTGG TGGGGCCGAA CGGCTCCGGG
AAGTCGACGC TCCTGCGCTG CCTGGCACGG GTGCTGAGGC CCCGTGTGGG TACGGTTCTC
CTGGACGGGA AGAACCTCGC CTCCCTGCGC GGGAGGGAGA TCGGCCGGTG TTTGGGGTAC
GTGCCGCCGC CGGGCACGGG GCAGGCCTTT CCCTGCACCG TGCTGGAAAC GGTGCTCCAC
GGGCGCCGTC CCTATGTTAC GTGGGGGGTT AGCCAACACG ATCTGGCGGT GGCGGCTGGC
GCGCTGGGCT ACCTAGGTCT CACCGGCCTG GCGGAACGGC AGCTCAACGA GCTCTCGAGC
GGCCAGCGGC AGAAGGTGCT CATCGCCCGT GCCCTGGCTC AGGAGCCGGA GGTTTTTCTG
CTGGATGAGC CCACGGCCAC GCTGGACATC CGCTACCAGC TCGAGGTCCT GGCCCTGATA
AAGGACTTTG TCACGAAACA GGGACGGGTG GCGGTGTTTG TCCTGCACGA CCTGAACCTG
GCGAGCCGCT TTGCTGACCG GATCCTGCTG CTCGGCGAAG GGCGGATTTG TGCCGCCGGC
GTTCCTAATG AGGTGTTCAC GCCGGAAAAC GTGCGCGCGG TCTACGGGGT GGATGCGGTG
GTAACCGAAA CCCCGTGGGG TCTCCAGGTA ACTCCGGTGG CGCCGGTGGG CGCGCCGGCG
GGAGAGGAAG TCACGGAAGG GCCGAAGGCG GCGGTACGGC CGTGA
 
Protein sequence
MRLQVKGVSF AYGSAPVLDN VAFRVRAGET LGVVGPNGSG KSTLLRCLAR VLRPRVGTVL 
LDGKNLASLR GREIGRCLGY VPPPGTGQAF PCTVLETVLH GRRPYVTWGV SQHDLAVAAG
ALGYLGLTGL AERQLNELSS GQRQKVLIAR ALAQEPEVFL LDEPTATLDI RYQLEVLALI
KDFVTKQGRV AVFVLHDLNL ASRFADRILL LGEGRICAAG VPNEVFTPEN VRAVYGVDAV
VTETPWGLQV TPVAPVGAPA GEEVTEGPKA AVRP