Gene Daud_0003 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaud_0003 
Symbol 
ID6027640 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Desulforudis audaxviator MP104C 
KingdomBacteria 
Replicon accessionNC_010424 
Strand
Start bp2761 
End bp3843 
Gene Length1083 bp 
Protein Length360 aa 
Translation table11 
GC content60% 
IMG OID641592851 
ProductDNA replication and repair protein RecF 
Protein accessionYP_001716204 
Protein GI169830222 
COG category[L] Replication, recombination and repair 
COG ID[COG1195] Recombinational DNA repair ATPase (RecF pathway) 
TIGRFAM ID[TIGR00611] recF protein 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.447101 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCGCTTGA CTCGCATCAA AGCCGGTAAC TTCAGGAATT TTCAGCACCT GGACGTTCAG 
CCGGCGGCCG GCCTGAACAT TGTCCGGGGA AGGAACGCGC AAGGGAAAAC GAACTTCATC
GAGGCCGTGT TCTTTGCGCT GCGTGGGCAC TCGTTCCGTT CCTTGCGCGA CCGGGAGTTG
GTGACCTGGG GCCAGGAAAG TGCGTTTGTG GAGGCCGAAC TGGAAGGAAA AGACGGCCGT
ACCAGGGTGC GCGCGGAACT GAACCCGGCG GGCAAGAAAA TCGTTTGGGC CGGGGAACCG
GTGGGTAAAG CAGAACTGGC GGTCCGGCTG GGGACGGTCC TCTTTACACC GGACGACCTA
AGCCTCATCA AGGGTGGGCC GCGTGAGCGC CGCCGGTTTT TAGACCTCGA ACTGGGAATT
TTCGTGCCCG GCTATCTAAC TGCGCTGCAA CTATACCGGC GGGCGCTTGA ACAGCGGAAT
CACCTGCTCC GGATGGGTGG TGGGAGAAGA TATTCCGAGC TTCTCGATCT GTGGACCGAT
GAGGTCTGCA AGTATGGTAT GATGCTGCTG TCCGGGCGCC TGGAGATACT GAAGGAATTC
GCCCCGCTGG CGTGTCGGCT TTTCGGTGCA TGGGCCGGTG AAGAACTGGC GGTCCGGTAC
CGTAGTTCCG TCGGACTGTC CAACGGCGTA CGGACGCCGG GAGCTGGTGA CCTCCGGGAG
ACTCTGGCCG CCGTCCGCCA GGACGAAATC AGGGCCGGGC AGACCCAGGC TGGGCCGCAC
CTGGACGACC TTGCCTTTAT GGTGAACGGA AAGGAAGGCC GGCCCTTTGC TTCCCAGGGT
CAGCAGCGCT CCGTGGTCCT GGCCCTTAAA CTGGCTCAGG TGTTCCTGTG GAAGCGCCAC
ACCGGGGAGG CTCCCGTGGT TCTGCTCGAC GACCTGTTGT TTGAATTTGA CCGGGAACGC
CGTGACAAGG TGTTGGAAAC GCTCCAAAAC GACGTCCAGG TGTTCATTAC CACCGGAGAG
CGTGTTTTGA GCGGGAGTCG TGTTTTTTGC GTCCATTCTG GAAATATTCA GGAGGAGAGT
TGA
 
Protein sequence
MRLTRIKAGN FRNFQHLDVQ PAAGLNIVRG RNAQGKTNFI EAVFFALRGH SFRSLRDREL 
VTWGQESAFV EAELEGKDGR TRVRAELNPA GKKIVWAGEP VGKAELAVRL GTVLFTPDDL
SLIKGGPRER RRFLDLELGI FVPGYLTALQ LYRRALEQRN HLLRMGGGRR YSELLDLWTD
EVCKYGMMLL SGRLEILKEF APLACRLFGA WAGEELAVRY RSSVGLSNGV RTPGAGDLRE
TLAAVRQDEI RAGQTQAGPH LDDLAFMVNG KEGRPFASQG QQRSVVLALK LAQVFLWKRH
TGEAPVVLLD DLLFEFDRER RDKVLETLQN DVQVFITTGE RVLSGSRVFC VHSGNIQEES